Gene : Pp3s34_580 P. patens v3.3
Defline:  (1 of 3) PF00936 - BMC domain (BMC) Genomic Order:  67
Name:  ? Pp3s34_580 Secondary Identifier:  ? PAC:32948326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s34_580 0.5kb upstream 0.5kb upstream 776 true scaffold_34: 182896-183671 Physcomitrium patens
Pp3s34_580 0.5kb upstream 0.5kb upstream 500 false scaffold_34: 183172-183671 Physcomitrium patens
Pp3s34_580 0.5kb downstream 0.5kb downstream 776 true scaffold_34: 182396-183171 Physcomitrium patens
Pp3s34_580 0.5kb downstream 0.5kb downstream 500 false scaffold_34: 182396-182895 Physcomitrium patens
Pp3s34_580 1.0kb upstream 1.0kb upstream 1276 true scaffold_34: 182896-184171 Physcomitrium patens
Pp3s34_580 1.0kb upstream 1.0kb upstream 1000 false scaffold_34: 183172-184171 Physcomitrium patens
Pp3s34_580 1.0kb downstream 1.0kb downstream 1276 true scaffold_34: 181896-183171 Physcomitrium patens
Pp3s34_580 1.0kb downstream 1.0kb downstream 1000 false scaffold_34: 181896-182895 Physcomitrium patens
Pp3s34_580 2.0kb upstream 2.0kb upstream 2276 true scaffold_34: 182896-185171 Physcomitrium patens
Pp3s34_580 2.0kb upstream 2.0kb upstream 2000 false scaffold_34: 183172-185171 Physcomitrium patens
Pp3s34_580 2.0kb downstream 2.0kb downstream 2276 true scaffold_34: 180896-183171 Physcomitrium patens
Pp3s34_580 2.0kb downstream 2.0kb downstream 2000 false scaffold_34: 180896-182895 Physcomitrium patens
Pp3s34_580 5.0kb upstream 5.0kb upstream 5276 true scaffold_34: 182896-188171 Physcomitrium patens
Pp3s34_580 5.0kb upstream 5.0kb upstream 5000 false scaffold_34: 183172-188171 Physcomitrium patens
Pp3s34_580 5.0kb downstream 5.0kb downstream 5276 true scaffold_34: 177896-183171 Physcomitrium patens
Pp3s34_580 5.0kb downstream 5.0kb downstream 5000 false scaffold_34: 177896-182895 Physcomitrium patens
Pp3s34_580 10.0kb upstream 10.0kb upstream 10276 true scaffold_34: 182896-193171 Physcomitrium patens
Pp3s34_580 10.0kb upstream 10.0kb upstream 10000 false scaffold_34: 183172-193171 Physcomitrium patens
Pp3s34_580 10.0kb downstream 10.0kb downstream 10276 true scaffold_34: 172896-183171 Physcomitrium patens
Pp3s34_580 10.0kb downstream 10.0kb downstream 10000 false scaffold_34: 172896-182895 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121336727 5274 Embryophyte View MSA
123427045 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain