Gene : Pp3s34_280 P. patens v3.3
Defline:  (1 of 1) PF07905//PF13556 - Purine catabolism regulatory protein-like family (PucR) // PucR C-terminal helix-turn-helix domain (HTH_30) Genomic Order:  23
Name:  ? Pp3s34_280 Secondary Identifier:  ? PAC:32948269
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s34_280 0.5kb upstream 0.5kb upstream 2153 true scaffold_34: 67179-69331 Physcomitrium patens
Pp3s34_280 0.5kb upstream 0.5kb upstream 500 false scaffold_34: 67179-67678 Physcomitrium patens
Pp3s34_280 0.5kb downstream 0.5kb downstream 2153 true scaffold_34: 67679-69831 Physcomitrium patens
Pp3s34_280 0.5kb downstream 0.5kb downstream 500 false scaffold_34: 69332-69831 Physcomitrium patens
Pp3s34_280 1.0kb upstream 1.0kb upstream 2653 true scaffold_34: 66679-69331 Physcomitrium patens
Pp3s34_280 1.0kb upstream 1.0kb upstream 1000 false scaffold_34: 66679-67678 Physcomitrium patens
Pp3s34_280 1.0kb downstream 1.0kb downstream 2653 true scaffold_34: 67679-70331 Physcomitrium patens
Pp3s34_280 1.0kb downstream 1.0kb downstream 1000 false scaffold_34: 69332-70331 Physcomitrium patens
Pp3s34_280 2.0kb upstream 2.0kb upstream 3653 true scaffold_34: 65679-69331 Physcomitrium patens
Pp3s34_280 2.0kb upstream 2.0kb upstream 2000 false scaffold_34: 65679-67678 Physcomitrium patens
Pp3s34_280 2.0kb downstream 2.0kb downstream 3653 true scaffold_34: 67679-71331 Physcomitrium patens
Pp3s34_280 2.0kb downstream 2.0kb downstream 2000 false scaffold_34: 69332-71331 Physcomitrium patens
Pp3s34_280 5.0kb upstream 5.0kb upstream 6653 true scaffold_34: 62679-69331 Physcomitrium patens
Pp3s34_280 5.0kb upstream 5.0kb upstream 5000 false scaffold_34: 62679-67678 Physcomitrium patens
Pp3s34_280 5.0kb downstream 5.0kb downstream 6653 true scaffold_34: 67679-74331 Physcomitrium patens
Pp3s34_280 5.0kb downstream 5.0kb downstream 5000 false scaffold_34: 69332-74331 Physcomitrium patens
Pp3s34_280 10.0kb upstream 10.0kb upstream 11653 true scaffold_34: 57679-69331 Physcomitrium patens
Pp3s34_280 10.0kb upstream 10.0kb upstream 10000 false scaffold_34: 57679-67678 Physcomitrium patens
Pp3s34_280 10.0kb downstream 10.0kb downstream 11653 true scaffold_34: 67679-79331 Physcomitrium patens
Pp3s34_280 10.0kb downstream 10.0kb downstream 10000 false scaffold_34: 69332-79331 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331298 5274 Embryophyte Singleton cluster - no MSA
123368240 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain