Gene : Pp3s34_560 P. patens v3.3
Defline:  (1 of 1) PF03319 - Ethanolamine utilisation protein EutN/carboxysome (EutN_CcmL) Genomic Order:  65
Name:  ? Pp3s34_560 Secondary Identifier:  ? PAC:32948267
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0 Pathways

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s34_560 0.5kb upstream 0.5kb upstream 776 true scaffold_34: 181023-181798 Physcomitrium patens
Pp3s34_560 0.5kb upstream 0.5kb upstream 500 false scaffold_34: 181299-181798 Physcomitrium patens
Pp3s34_560 0.5kb downstream 0.5kb downstream 776 true scaffold_34: 180523-181298 Physcomitrium patens
Pp3s34_560 0.5kb downstream 0.5kb downstream 500 false scaffold_34: 180523-181022 Physcomitrium patens
Pp3s34_560 1.0kb upstream 1.0kb upstream 1276 true scaffold_34: 181023-182298 Physcomitrium patens
Pp3s34_560 1.0kb upstream 1.0kb upstream 1000 false scaffold_34: 181299-182298 Physcomitrium patens
Pp3s34_560 1.0kb downstream 1.0kb downstream 1276 true scaffold_34: 180023-181298 Physcomitrium patens
Pp3s34_560 1.0kb downstream 1.0kb downstream 1000 false scaffold_34: 180023-181022 Physcomitrium patens
Pp3s34_560 2.0kb upstream 2.0kb upstream 2276 true scaffold_34: 181023-183298 Physcomitrium patens
Pp3s34_560 2.0kb upstream 2.0kb upstream 2000 false scaffold_34: 181299-183298 Physcomitrium patens
Pp3s34_560 2.0kb downstream 2.0kb downstream 2276 true scaffold_34: 179023-181298 Physcomitrium patens
Pp3s34_560 2.0kb downstream 2.0kb downstream 2000 false scaffold_34: 179023-181022 Physcomitrium patens
Pp3s34_560 5.0kb upstream 5.0kb upstream 5276 true scaffold_34: 181023-186298 Physcomitrium patens
Pp3s34_560 5.0kb upstream 5.0kb upstream 5000 false scaffold_34: 181299-186298 Physcomitrium patens
Pp3s34_560 5.0kb downstream 5.0kb downstream 5276 true scaffold_34: 176023-181298 Physcomitrium patens
Pp3s34_560 5.0kb downstream 5.0kb downstream 5000 false scaffold_34: 176023-181022 Physcomitrium patens
Pp3s34_560 10.0kb upstream 10.0kb upstream 10276 true scaffold_34: 181023-191298 Physcomitrium patens
Pp3s34_560 10.0kb upstream 10.0kb upstream 10000 false scaffold_34: 181299-191298 Physcomitrium patens
Pp3s34_560 10.0kb downstream 10.0kb downstream 10276 true scaffold_34: 171023-181298 Physcomitrium patens
Pp3s34_560 10.0kb downstream 10.0kb downstream 10000 false scaffold_34: 171023-181022 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331297 5274 Embryophyte Singleton cluster - no MSA
123368239 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain