Gene : Pp3s32_190 P. patens v3.3
Defline:  (1 of 1) PTHR30136 - HTH-TYPE TRANSCRIPTIONAL REPRESSOR Genomic Order:  18
Name:  ? Pp3s32_190 Secondary Identifier:  ? PAC:32948423
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s32_190 0.5kb upstream 0.5kb upstream 2343 true scaffold_32: 71822-74164 Physcomitrium patens
Pp3s32_190 0.5kb upstream 0.5kb upstream 500 false scaffold_32: 73665-74164 Physcomitrium patens
Pp3s32_190 0.5kb downstream 0.5kb downstream 2343 true scaffold_32: 71322-73664 Physcomitrium patens
Pp3s32_190 0.5kb downstream 0.5kb downstream 500 false scaffold_32: 71322-71821 Physcomitrium patens
Pp3s32_190 1.0kb upstream 1.0kb upstream 2843 true scaffold_32: 71822-74664 Physcomitrium patens
Pp3s32_190 1.0kb upstream 1.0kb upstream 1000 false scaffold_32: 73665-74664 Physcomitrium patens
Pp3s32_190 1.0kb downstream 1.0kb downstream 2843 true scaffold_32: 70822-73664 Physcomitrium patens
Pp3s32_190 1.0kb downstream 1.0kb downstream 1000 false scaffold_32: 70822-71821 Physcomitrium patens
Pp3s32_190 2.0kb upstream 2.0kb upstream 3843 true scaffold_32: 71822-75664 Physcomitrium patens
Pp3s32_190 2.0kb upstream 2.0kb upstream 2000 false scaffold_32: 73665-75664 Physcomitrium patens
Pp3s32_190 2.0kb downstream 2.0kb downstream 3843 true scaffold_32: 69822-73664 Physcomitrium patens
Pp3s32_190 2.0kb downstream 2.0kb downstream 2000 false scaffold_32: 69822-71821 Physcomitrium patens
Pp3s32_190 5.0kb upstream 5.0kb upstream 6843 true scaffold_32: 71822-78664 Physcomitrium patens
Pp3s32_190 5.0kb upstream 5.0kb upstream 5000 false scaffold_32: 73665-78664 Physcomitrium patens
Pp3s32_190 5.0kb downstream 5.0kb downstream 6843 true scaffold_32: 66822-73664 Physcomitrium patens
Pp3s32_190 5.0kb downstream 5.0kb downstream 5000 false scaffold_32: 66822-71821 Physcomitrium patens
Pp3s32_190 10.0kb upstream 10.0kb upstream 11843 true scaffold_32: 71822-83664 Physcomitrium patens
Pp3s32_190 10.0kb upstream 10.0kb upstream 10000 false scaffold_32: 73665-83664 Physcomitrium patens
Pp3s32_190 10.0kb downstream 10.0kb downstream 11843 true scaffold_32: 61822-73664 Physcomitrium patens
Pp3s32_190 10.0kb downstream 10.0kb downstream 10000 false scaffold_32: 61822-71821 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331399 5274 Embryophyte Singleton cluster - no MSA
123368335 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain