Gene : Pp3s34_210 P. patens v3.3
Defline:  (1 of 1) PTHR10638:SF21 - PRIMARY AMINE OXIDASE Genomic Order:  16
Name:  ? Pp3s34_210 Secondary Identifier:  ? PAC:32948280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s34_210 0.5kb upstream 0.5kb upstream 6004 true scaffold_34: 45081-51084 Physcomitrium patens
Pp3s34_210 0.5kb upstream 0.5kb upstream 500 false scaffold_34: 50585-51084 Physcomitrium patens
Pp3s34_210 0.5kb downstream 0.5kb downstream 6004 true scaffold_34: 44581-50584 Physcomitrium patens
Pp3s34_210 0.5kb downstream 0.5kb downstream 500 false scaffold_34: 44581-45080 Physcomitrium patens
Pp3s34_210 1.0kb upstream 1.0kb upstream 6504 true scaffold_34: 45081-51584 Physcomitrium patens
Pp3s34_210 1.0kb upstream 1.0kb upstream 1000 false scaffold_34: 50585-51584 Physcomitrium patens
Pp3s34_210 1.0kb downstream 1.0kb downstream 6504 true scaffold_34: 44081-50584 Physcomitrium patens
Pp3s34_210 1.0kb downstream 1.0kb downstream 1000 false scaffold_34: 44081-45080 Physcomitrium patens
Pp3s34_210 2.0kb upstream 2.0kb upstream 7504 true scaffold_34: 45081-52584 Physcomitrium patens
Pp3s34_210 2.0kb upstream 2.0kb upstream 2000 false scaffold_34: 50585-52584 Physcomitrium patens
Pp3s34_210 2.0kb downstream 2.0kb downstream 7504 true scaffold_34: 43081-50584 Physcomitrium patens
Pp3s34_210 2.0kb downstream 2.0kb downstream 2000 false scaffold_34: 43081-45080 Physcomitrium patens
Pp3s34_210 5.0kb upstream 5.0kb upstream 10504 true scaffold_34: 45081-55584 Physcomitrium patens
Pp3s34_210 5.0kb upstream 5.0kb upstream 5000 false scaffold_34: 50585-55584 Physcomitrium patens
Pp3s34_210 5.0kb downstream 5.0kb downstream 10504 true scaffold_34: 40081-50584 Physcomitrium patens
Pp3s34_210 5.0kb downstream 5.0kb downstream 5000 false scaffold_34: 40081-45080 Physcomitrium patens
Pp3s34_210 10.0kb upstream 10.0kb upstream 15504 true scaffold_34: 45081-60584 Physcomitrium patens
Pp3s34_210 10.0kb upstream 10.0kb upstream 10000 false scaffold_34: 50585-60584 Physcomitrium patens
Pp3s34_210 10.0kb downstream 10.0kb downstream 15504 true scaffold_34: 35081-50584 Physcomitrium patens
Pp3s34_210 10.0kb downstream 10.0kb downstream 10000 false scaffold_34: 35081-45080 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331307 5274 Embryophyte Singleton cluster - no MSA
123368247 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain