Gene : Pp3s70_190 P. patens v3.3
Defline:  (1 of 1) PTHR35561:SF1 - 2'-5'-RNA LIGASE Genomic Order:  19
Name:  ? Pp3s70_190 Secondary Identifier:  ? PAC:32963368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s70_190 0.5kb upstream 0.5kb upstream 2402 true scaffold_70: 56820-59221 Physcomitrium patens
Pp3s70_190 0.5kb upstream 0.5kb upstream 500 false scaffold_70: 58722-59221 Physcomitrium patens
Pp3s70_190 0.5kb downstream 0.5kb downstream 2402 true scaffold_70: 56320-58721 Physcomitrium patens
Pp3s70_190 0.5kb downstream 0.5kb downstream 500 false scaffold_70: 56320-56819 Physcomitrium patens
Pp3s70_190 1.0kb upstream 1.0kb upstream 2902 true scaffold_70: 56820-59721 Physcomitrium patens
Pp3s70_190 1.0kb upstream 1.0kb upstream 1000 false scaffold_70: 58722-59721 Physcomitrium patens
Pp3s70_190 1.0kb downstream 1.0kb downstream 2902 true scaffold_70: 55820-58721 Physcomitrium patens
Pp3s70_190 1.0kb downstream 1.0kb downstream 1000 false scaffold_70: 55820-56819 Physcomitrium patens
Pp3s70_190 2.0kb upstream 2.0kb upstream 3902 true scaffold_70: 56820-60721 Physcomitrium patens
Pp3s70_190 2.0kb upstream 2.0kb upstream 2000 false scaffold_70: 58722-60721 Physcomitrium patens
Pp3s70_190 2.0kb downstream 2.0kb downstream 3902 true scaffold_70: 54820-58721 Physcomitrium patens
Pp3s70_190 2.0kb downstream 2.0kb downstream 2000 false scaffold_70: 54820-56819 Physcomitrium patens
Pp3s70_190 5.0kb upstream 5.0kb upstream 4321 true scaffold_70: 56820-61140 Physcomitrium patens
Pp3s70_190 5.0kb upstream 5.0kb upstream 2419 false scaffold_70: 58722-61140 Physcomitrium patens
Pp3s70_190 5.0kb downstream 5.0kb downstream 6902 true scaffold_70: 51820-58721 Physcomitrium patens
Pp3s70_190 5.0kb downstream 5.0kb downstream 5000 false scaffold_70: 51820-56819 Physcomitrium patens
Pp3s70_190 10.0kb upstream 10.0kb upstream 4321 true scaffold_70: 56820-61140 Physcomitrium patens
Pp3s70_190 10.0kb upstream 10.0kb upstream 2419 false scaffold_70: 58722-61140 Physcomitrium patens
Pp3s70_190 10.0kb downstream 10.0kb downstream 11902 true scaffold_70: 46820-58721 Physcomitrium patens
Pp3s70_190 10.0kb downstream 10.0kb downstream 10000 false scaffold_70: 46820-56819 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121333281 5274 Embryophyte Singleton cluster - no MSA
123370177 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain