Gene : Pp3s70_20 P. patens v3.3
Defline:  (1 of 1) PF00580 - UvrD/REP helicase N-terminal domain (UvrD-helicase) Genomic Order:  2
Name:  ? Pp3s70_20 Secondary Identifier:  ? PAC:32963358
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s70_20 0.5kb upstream 0.5kb upstream 6607 true scaffold_70: 4483-11089 Physcomitrium patens
Pp3s70_20 0.5kb upstream 0.5kb upstream 500 false scaffold_70: 10590-11089 Physcomitrium patens
Pp3s70_20 0.5kb downstream 0.5kb downstream 6607 true scaffold_70: 3983-10589 Physcomitrium patens
Pp3s70_20 0.5kb downstream 0.5kb downstream 500 false scaffold_70: 3983-4482 Physcomitrium patens
Pp3s70_20 1.0kb upstream 1.0kb upstream 7107 true scaffold_70: 4483-11589 Physcomitrium patens
Pp3s70_20 1.0kb upstream 1.0kb upstream 1000 false scaffold_70: 10590-11589 Physcomitrium patens
Pp3s70_20 1.0kb downstream 1.0kb downstream 7107 true scaffold_70: 3483-10589 Physcomitrium patens
Pp3s70_20 1.0kb downstream 1.0kb downstream 1000 false scaffold_70: 3483-4482 Physcomitrium patens
Pp3s70_20 2.0kb upstream 2.0kb upstream 8107 true scaffold_70: 4483-12589 Physcomitrium patens
Pp3s70_20 2.0kb upstream 2.0kb upstream 2000 false scaffold_70: 10590-12589 Physcomitrium patens
Pp3s70_20 2.0kb downstream 2.0kb downstream 8107 true scaffold_70: 2483-10589 Physcomitrium patens
Pp3s70_20 2.0kb downstream 2.0kb downstream 2000 false scaffold_70: 2483-4482 Physcomitrium patens
Pp3s70_20 5.0kb upstream 5.0kb upstream 11107 true scaffold_70: 4483-15589 Physcomitrium patens
Pp3s70_20 5.0kb upstream 5.0kb upstream 5000 false scaffold_70: 10590-15589 Physcomitrium patens
Pp3s70_20 5.0kb downstream 5.0kb downstream 10589 true scaffold_70: 1-10589 Physcomitrium patens
Pp3s70_20 5.0kb downstream 5.0kb downstream 4482 false scaffold_70: 1-4482 Physcomitrium patens
Pp3s70_20 10.0kb upstream 10.0kb upstream 16107 true scaffold_70: 4483-20589 Physcomitrium patens
Pp3s70_20 10.0kb upstream 10.0kb upstream 10000 false scaffold_70: 10590-20589 Physcomitrium patens
Pp3s70_20 10.0kb downstream 10.0kb downstream 10589 true scaffold_70: 1-10589 Physcomitrium patens
Pp3s70_20 10.0kb downstream 10.0kb downstream 4482 false scaffold_70: 1-4482 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348926 5274 Embryophyte View MSA
123427245 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain