Gene : Pp3s1006_30 P. patens v3.3
Genomic Order:  1 Name:  ? Pp3s1006_30
Secondary Identifier:  ? PAC:32932621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s1006_30 0.5kb upstream 0.5kb upstream 2368 true scaffold_1006: 1-2368 Physcomitrium patens
Pp3s1006_30 0.5kb upstream 0.5kb upstream 30 false scaffold_1006: 1-30 Physcomitrium patens
Pp3s1006_30 0.5kb downstream 0.5kb downstream 2838 true scaffold_1006: 31-2868 Physcomitrium patens
Pp3s1006_30 0.5kb downstream 0.5kb downstream 500 false scaffold_1006: 2369-2868 Physcomitrium patens
Pp3s1006_30 1.0kb upstream 1.0kb upstream 2368 true scaffold_1006: 1-2368 Physcomitrium patens
Pp3s1006_30 1.0kb upstream 1.0kb upstream 30 false scaffold_1006: 1-30 Physcomitrium patens
Pp3s1006_30 1.0kb downstream 1.0kb downstream 3338 true scaffold_1006: 31-3368 Physcomitrium patens
Pp3s1006_30 1.0kb downstream 1.0kb downstream 1000 false scaffold_1006: 2369-3368 Physcomitrium patens
Pp3s1006_30 2.0kb upstream 2.0kb upstream 2368 true scaffold_1006: 1-2368 Physcomitrium patens
Pp3s1006_30 2.0kb upstream 2.0kb upstream 30 false scaffold_1006: 1-30 Physcomitrium patens
Pp3s1006_30 2.0kb downstream 2.0kb downstream 3338 true scaffold_1006: 31-3368 Physcomitrium patens
Pp3s1006_30 2.0kb downstream 2.0kb downstream 1000 false scaffold_1006: 2369-3368 Physcomitrium patens
Pp3s1006_30 5.0kb upstream 5.0kb upstream 2368 true scaffold_1006: 1-2368 Physcomitrium patens
Pp3s1006_30 5.0kb upstream 5.0kb upstream 30 false scaffold_1006: 1-30 Physcomitrium patens
Pp3s1006_30 5.0kb downstream 5.0kb downstream 3338 true scaffold_1006: 31-3368 Physcomitrium patens
Pp3s1006_30 5.0kb downstream 5.0kb downstream 1000 false scaffold_1006: 2369-3368 Physcomitrium patens
Pp3s1006_30 10.0kb upstream 10.0kb upstream 2368 true scaffold_1006: 1-2368 Physcomitrium patens
Pp3s1006_30 10.0kb upstream 10.0kb upstream 30 false scaffold_1006: 1-30 Physcomitrium patens
Pp3s1006_30 10.0kb downstream 10.0kb downstream 3338 true scaffold_1006: 31-3368 Physcomitrium patens
Pp3s1006_30 10.0kb downstream 10.0kb downstream 1000 false scaffold_1006: 2369-3368 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350711 5274 Embryophyte View MSA
123381855 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.027     Low High

0 Strain