Gene : Pp3c1_10860 P. patens v3.3
Defline:  (1 of 32) 2.7.11.25 - Mitogen-activated protein kinase kinase kinase / MLTK Genomic Order:  529
Name:  ? Pp3c1_10860 Secondary Identifier:  ? PAC:32968625
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_10860 0.5kb upstream 0.5kb upstream 6294 true Chr01: 7833073-7839366 Physcomitrium patens
Pp3c1_10860 0.5kb upstream 0.5kb upstream 500 false Chr01: 7833073-7833572 Physcomitrium patens
Pp3c1_10860 0.5kb downstream 0.5kb downstream 6294 true Chr01: 7833573-7839866 Physcomitrium patens
Pp3c1_10860 0.5kb downstream 0.5kb downstream 500 false Chr01: 7839367-7839866 Physcomitrium patens
Pp3c1_10860 1.0kb upstream 1.0kb upstream 6794 true Chr01: 7832573-7839366 Physcomitrium patens
Pp3c1_10860 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7832573-7833572 Physcomitrium patens
Pp3c1_10860 1.0kb downstream 1.0kb downstream 6794 true Chr01: 7833573-7840366 Physcomitrium patens
Pp3c1_10860 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7839367-7840366 Physcomitrium patens
Pp3c1_10860 2.0kb upstream 2.0kb upstream 7794 true Chr01: 7831573-7839366 Physcomitrium patens
Pp3c1_10860 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7831573-7833572 Physcomitrium patens
Pp3c1_10860 2.0kb downstream 2.0kb downstream 7794 true Chr01: 7833573-7841366 Physcomitrium patens
Pp3c1_10860 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7839367-7841366 Physcomitrium patens
Pp3c1_10860 5.0kb upstream 5.0kb upstream 10794 true Chr01: 7828573-7839366 Physcomitrium patens
Pp3c1_10860 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7828573-7833572 Physcomitrium patens
Pp3c1_10860 5.0kb downstream 5.0kb downstream 10794 true Chr01: 7833573-7844366 Physcomitrium patens
Pp3c1_10860 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7839367-7844366 Physcomitrium patens
Pp3c1_10860 10.0kb upstream 10.0kb upstream 15794 true Chr01: 7823573-7839366 Physcomitrium patens
Pp3c1_10860 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7823573-7833572 Physcomitrium patens
Pp3c1_10860 10.0kb downstream 10.0kb downstream 15794 true Chr01: 7833573-7849366 Physcomitrium patens
Pp3c1_10860 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7839367-7849366 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351920 5274 Embryophyte View MSA
123427651 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.609       High
cufflinks 4.078        
cufflinks 5.302        
cufflinks 6.195        
cufflinks 2.927        
cufflinks 0.83        
cufflinks 1.404        
cufflinks 5.518        
cufflinks 1.183        
cufflinks 1.108        
cufflinks 0.561        
cufflinks 1.872        
cufflinks 5.866        
cufflinks 3.482        
cufflinks 1.126        
cufflinks 1.092        
cufflinks 1.564        
cufflinks 12.113       High
cufflinks 16.681       High
cufflinks 2.267        
cufflinks 3.135        
cufflinks 6.408        
cufflinks 0.063       Low
cufflinks 1.591        
cufflinks 2.765        
cufflinks 1.777        
cufflinks 0.555        
cufflinks 1.743        
cufflinks 0.042     Low Low
cufflinks 4.674        

0 Strain