Gene : Pp3c1_1870 P. patens v3.3
Defline:  (1 of 1) PTHR11941:SF54 - ENOYL-COA HYDRATASE, MITOCHONDRIAL Genomic Order:  83
Name:  ? Pp3c1_1870 Secondary Identifier:  ? PAC:32966933
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Sequence Feature Displayer

Ontology Annotation Displayer

10 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens ILEUDEG-PWY Physcomitrium patens pathologic  
Ppatens PWY-5136 Physcomitrium patens pathologic  
Ppatens PWY-5138 Physcomitrium patens pathologic  
Ppatens PWY-561 Physcomitrium patens pathologic  
Ppatens PWY-6435 Physcomitrium patens pathologic  
Ppatens PWY-7036 Physcomitrium patens pathologic  
Ppatens PWY-735 Physcomitrium patens pathologic  
Ppatens PWY-7606 Physcomitrium patens pathologic  
Ppatens PWY-7726 Physcomitrium patens pathologic  
Ppatens VALDEG-PWY Physcomitrium patens pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_1870 0.5kb upstream 0.5kb upstream 3152 true Chr01: 1218592-1221743 Physcomitrium patens
Pp3c1_1870 0.5kb upstream 0.5kb upstream 500 false Chr01: 1221244-1221743 Physcomitrium patens
Pp3c1_1870 0.5kb downstream 0.5kb downstream 3152 true Chr01: 1218092-1221243 Physcomitrium patens
Pp3c1_1870 0.5kb downstream 0.5kb downstream 500 false Chr01: 1218092-1218591 Physcomitrium patens
Pp3c1_1870 1.0kb upstream 1.0kb upstream 3652 true Chr01: 1218592-1222243 Physcomitrium patens
Pp3c1_1870 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1221244-1222243 Physcomitrium patens
Pp3c1_1870 1.0kb downstream 1.0kb downstream 3652 true Chr01: 1217592-1221243 Physcomitrium patens
Pp3c1_1870 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1217592-1218591 Physcomitrium patens
Pp3c1_1870 2.0kb upstream 2.0kb upstream 4652 true Chr01: 1218592-1223243 Physcomitrium patens
Pp3c1_1870 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1221244-1223243 Physcomitrium patens
Pp3c1_1870 2.0kb downstream 2.0kb downstream 4652 true Chr01: 1216592-1221243 Physcomitrium patens
Pp3c1_1870 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1216592-1218591 Physcomitrium patens
Pp3c1_1870 5.0kb upstream 5.0kb upstream 7652 true Chr01: 1218592-1226243 Physcomitrium patens
Pp3c1_1870 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1221244-1226243 Physcomitrium patens
Pp3c1_1870 5.0kb downstream 5.0kb downstream 7652 true Chr01: 1213592-1221243 Physcomitrium patens
Pp3c1_1870 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1213592-1218591 Physcomitrium patens
Pp3c1_1870 10.0kb upstream 10.0kb upstream 12652 true Chr01: 1218592-1231243 Physcomitrium patens
Pp3c1_1870 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1221244-1231243 Physcomitrium patens
Pp3c1_1870 10.0kb downstream 10.0kb downstream 12652 true Chr01: 1208592-1221243 Physcomitrium patens
Pp3c1_1870 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1208592-1218591 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351751 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.283     High High
cufflinks 28.02     High  
cufflinks 22.317     High  
cufflinks 23.291     High  
cufflinks 26.407     High  
cufflinks 44.897     High High
cufflinks 20.844       Low
cufflinks 23.677     High  
cufflinks 35.233     High  
cufflinks 31.715     High  
cufflinks 22.991     High  
cufflinks 39.208     High  
cufflinks 27.146     High  
cufflinks 30.7     High  
cufflinks 31.106     High  
cufflinks 50.48     High High
cufflinks 32.572     High  
cufflinks 18.154       Low
cufflinks 23.981     High  
cufflinks 22.376     High  
cufflinks 41.019     High  
cufflinks 26.606     High  
cufflinks 24.702     High  
cufflinks 28.8     High  
cufflinks 42.515     High  
cufflinks 20.277       Low
cufflinks 24.184     High  
cufflinks 45.064     High High
cufflinks 59.767     High High
cufflinks 29.27     High  

0 Strain