Gene : Pp3c1_200 P. patens v3.3
Defline:  (1 of 2) PTHR12320:SF7 - PROTEIN PHOSPHATASE 2C 26-RELATED Genomic Order:  14
Name:  ? Pp3c1_200 Secondary Identifier:  ? PAC:32969807
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_200 0.5kb upstream 0.5kb upstream 4124 true Chr01: 141343-145466 Physcomitrium patens
Pp3c1_200 0.5kb upstream 0.5kb upstream 500 false Chr01: 144967-145466 Physcomitrium patens
Pp3c1_200 0.5kb downstream 0.5kb downstream 4124 true Chr01: 140843-144966 Physcomitrium patens
Pp3c1_200 0.5kb downstream 0.5kb downstream 500 false Chr01: 140843-141342 Physcomitrium patens
Pp3c1_200 1.0kb upstream 1.0kb upstream 4624 true Chr01: 141343-145966 Physcomitrium patens
Pp3c1_200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 144967-145966 Physcomitrium patens
Pp3c1_200 1.0kb downstream 1.0kb downstream 4624 true Chr01: 140343-144966 Physcomitrium patens
Pp3c1_200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 140343-141342 Physcomitrium patens
Pp3c1_200 2.0kb upstream 2.0kb upstream 5624 true Chr01: 141343-146966 Physcomitrium patens
Pp3c1_200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 144967-146966 Physcomitrium patens
Pp3c1_200 2.0kb downstream 2.0kb downstream 5624 true Chr01: 139343-144966 Physcomitrium patens
Pp3c1_200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 139343-141342 Physcomitrium patens
Pp3c1_200 5.0kb upstream 5.0kb upstream 8624 true Chr01: 141343-149966 Physcomitrium patens
Pp3c1_200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 144967-149966 Physcomitrium patens
Pp3c1_200 5.0kb downstream 5.0kb downstream 8624 true Chr01: 136343-144966 Physcomitrium patens
Pp3c1_200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 136343-141342 Physcomitrium patens
Pp3c1_200 10.0kb upstream 10.0kb upstream 13624 true Chr01: 141343-154966 Physcomitrium patens
Pp3c1_200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 144967-154966 Physcomitrium patens
Pp3c1_200 10.0kb downstream 10.0kb downstream 13624 true Chr01: 131343-144966 Physcomitrium patens
Pp3c1_200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 131343-141342 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346475 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.437     High  
cufflinks 48.791     High  
cufflinks 60.355     High  
cufflinks 64.698     High  
cufflinks 35.404     High  
cufflinks 64.925     High  
cufflinks 27.312     High  
cufflinks 75.691     High High
cufflinks 50.459     High  
cufflinks 73.955     High  
cufflinks 67.954     High  
cufflinks 3.888       Low
cufflinks 48.075     High  
cufflinks 53.161     High  
cufflinks 28.998     High  
cufflinks 11.761       Low
cufflinks 26.681     High  
cufflinks 36.898     High  
cufflinks 30.138     High  
cufflinks 46.511     High  
cufflinks 58.412     High  
cufflinks 17.838     High  
cufflinks 3.16       Low
cufflinks 25.681     High  
cufflinks 56.395     High  
cufflinks 57.238     High  
cufflinks 32.203     High  
cufflinks 13.069       Low
cufflinks 69.485     High  
cufflinks 28.806     High  

0 Strain