Gene : Pp3c1_14000 P. patens v3.3
Defline:  (1 of 5) PTHR24073:SF509 - RAS-RELATED PROTEIN RAB-21 Genomic Order:  664
Name:  ? Pp3c1_14000 Secondary Identifier:  ? PAC:32971827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_14000 0.5kb upstream 0.5kb upstream 3033 true Chr01: 10181984-10185016 Physcomitrium patens
Pp3c1_14000 0.5kb upstream 0.5kb upstream 500 false Chr01: 10184517-10185016 Physcomitrium patens
Pp3c1_14000 0.5kb downstream 0.5kb downstream 3033 true Chr01: 10181484-10184516 Physcomitrium patens
Pp3c1_14000 0.5kb downstream 0.5kb downstream 500 false Chr01: 10181484-10181983 Physcomitrium patens
Pp3c1_14000 1.0kb upstream 1.0kb upstream 3533 true Chr01: 10181984-10185516 Physcomitrium patens
Pp3c1_14000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 10184517-10185516 Physcomitrium patens
Pp3c1_14000 1.0kb downstream 1.0kb downstream 3533 true Chr01: 10180984-10184516 Physcomitrium patens
Pp3c1_14000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10180984-10181983 Physcomitrium patens
Pp3c1_14000 2.0kb upstream 2.0kb upstream 4533 true Chr01: 10181984-10186516 Physcomitrium patens
Pp3c1_14000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 10184517-10186516 Physcomitrium patens
Pp3c1_14000 2.0kb downstream 2.0kb downstream 4533 true Chr01: 10179984-10184516 Physcomitrium patens
Pp3c1_14000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 10179984-10181983 Physcomitrium patens
Pp3c1_14000 5.0kb upstream 5.0kb upstream 7533 true Chr01: 10181984-10189516 Physcomitrium patens
Pp3c1_14000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 10184517-10189516 Physcomitrium patens
Pp3c1_14000 5.0kb downstream 5.0kb downstream 7533 true Chr01: 10176984-10184516 Physcomitrium patens
Pp3c1_14000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 10176984-10181983 Physcomitrium patens
Pp3c1_14000 10.0kb upstream 10.0kb upstream 12533 true Chr01: 10181984-10194516 Physcomitrium patens
Pp3c1_14000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 10184517-10194516 Physcomitrium patens
Pp3c1_14000 10.0kb downstream 10.0kb downstream 12533 true Chr01: 10171984-10184516 Physcomitrium patens
Pp3c1_14000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 10171984-10181983 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350094 5274 Embryophyte View MSA
123426834 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.569        
cufflinks 1.788        
cufflinks 1.067        
cufflinks 2.857       High
cufflinks 1.112        
cufflinks 1.497        
cufflinks 1.055       Low
cufflinks 1.795        
cufflinks 0.96       Low
cufflinks 1.558        
cufflinks 0.99       Low
cufflinks 1.044       Low
cufflinks 1.005       Low
cufflinks 1.917        
cufflinks 0.979       Low
cufflinks 0.874       Low
cufflinks 2.566       High
cufflinks 1.945        
cufflinks 1.647        
cufflinks 1.12        
cufflinks 1.079        
cufflinks 2.492       High
cufflinks 2.474       High
cufflinks 1.372        
cufflinks 1.903        
cufflinks 1.624        
cufflinks 1.224        
cufflinks 1.795        
cufflinks 1.47        
cufflinks 1.603        

0 Strain