Gene : Pp3c1_14760 P. patens v3.3
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  692
Name:  ? Pp3c1_14760 Secondary Identifier:  ? PAC:32967511
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_14760 0.5kb upstream 0.5kb upstream 3188 true Chr01: 11096280-11099467 Physcomitrium patens
Pp3c1_14760 0.5kb upstream 0.5kb upstream 500 false Chr01: 11096280-11096779 Physcomitrium patens
Pp3c1_14760 0.5kb downstream 0.5kb downstream 3188 true Chr01: 11096780-11099967 Physcomitrium patens
Pp3c1_14760 0.5kb downstream 0.5kb downstream 500 false Chr01: 11099468-11099967 Physcomitrium patens
Pp3c1_14760 1.0kb upstream 1.0kb upstream 3688 true Chr01: 11095780-11099467 Physcomitrium patens
Pp3c1_14760 1.0kb upstream 1.0kb upstream 1000 false Chr01: 11095780-11096779 Physcomitrium patens
Pp3c1_14760 1.0kb downstream 1.0kb downstream 3688 true Chr01: 11096780-11100467 Physcomitrium patens
Pp3c1_14760 1.0kb downstream 1.0kb downstream 1000 false Chr01: 11099468-11100467 Physcomitrium patens
Pp3c1_14760 2.0kb upstream 2.0kb upstream 4688 true Chr01: 11094780-11099467 Physcomitrium patens
Pp3c1_14760 2.0kb upstream 2.0kb upstream 2000 false Chr01: 11094780-11096779 Physcomitrium patens
Pp3c1_14760 2.0kb downstream 2.0kb downstream 4688 true Chr01: 11096780-11101467 Physcomitrium patens
Pp3c1_14760 2.0kb downstream 2.0kb downstream 2000 false Chr01: 11099468-11101467 Physcomitrium patens
Pp3c1_14760 5.0kb upstream 5.0kb upstream 7688 true Chr01: 11091780-11099467 Physcomitrium patens
Pp3c1_14760 5.0kb upstream 5.0kb upstream 5000 false Chr01: 11091780-11096779 Physcomitrium patens
Pp3c1_14760 5.0kb downstream 5.0kb downstream 7688 true Chr01: 11096780-11104467 Physcomitrium patens
Pp3c1_14760 5.0kb downstream 5.0kb downstream 5000 false Chr01: 11099468-11104467 Physcomitrium patens
Pp3c1_14760 10.0kb upstream 10.0kb upstream 12688 true Chr01: 11086780-11099467 Physcomitrium patens
Pp3c1_14760 10.0kb upstream 10.0kb upstream 10000 false Chr01: 11086780-11096779 Physcomitrium patens
Pp3c1_14760 10.0kb downstream 10.0kb downstream 12688 true Chr01: 11096780-11109467 Physcomitrium patens
Pp3c1_14760 10.0kb downstream 10.0kb downstream 10000 false Chr01: 11099468-11109467 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.419        
cufflinks 0.005     Low Low
cufflinks 0.525        
cufflinks 2.091       High
cufflinks 0.96        
cufflinks 0.004     Low Low
cufflinks 0.753        
cufflinks 0.875        
cufflinks 1.024        
cufflinks 0.039     Low Low
cufflinks 0.839        
cufflinks 0.615        
cufflinks 0.459        
cufflinks 0.669        
cufflinks 0.88        
cufflinks 1.753        
cufflinks 0.427        
cufflinks 0.877        
cufflinks 1.704        
cufflinks 0.838        
cufflinks 0.623        
cufflinks 0.281        
cufflinks 1.184        
cufflinks 1.775        
cufflinks 0.897        
cufflinks 0.076       Low
cufflinks 0.453        
cufflinks 0.559        
cufflinks 0.03     Low Low
cufflinks 0.419        

0 Strain