Gene : Pp3c1_29170 P. patens v3.3
Defline:  (1 of 1) PTHR11070//PTHR11070:SF15 - UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER Genomic Order:  1387
Name:  ? Pp3c1_29170 Secondary Identifier:  ? PAC:32970597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_29170 0.5kb upstream 0.5kb upstream 12516 true Chr01: 20773346-20785861 Physcomitrium patens
Pp3c1_29170 0.5kb upstream 0.5kb upstream 500 false Chr01: 20773346-20773845 Physcomitrium patens
Pp3c1_29170 0.5kb downstream 0.5kb downstream 12516 true Chr01: 20773846-20786361 Physcomitrium patens
Pp3c1_29170 0.5kb downstream 0.5kb downstream 500 false Chr01: 20785862-20786361 Physcomitrium patens
Pp3c1_29170 1.0kb upstream 1.0kb upstream 13016 true Chr01: 20772846-20785861 Physcomitrium patens
Pp3c1_29170 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20772846-20773845 Physcomitrium patens
Pp3c1_29170 1.0kb downstream 1.0kb downstream 13016 true Chr01: 20773846-20786861 Physcomitrium patens
Pp3c1_29170 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20785862-20786861 Physcomitrium patens
Pp3c1_29170 2.0kb upstream 2.0kb upstream 14016 true Chr01: 20771846-20785861 Physcomitrium patens
Pp3c1_29170 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20771846-20773845 Physcomitrium patens
Pp3c1_29170 2.0kb downstream 2.0kb downstream 14016 true Chr01: 20773846-20787861 Physcomitrium patens
Pp3c1_29170 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20785862-20787861 Physcomitrium patens
Pp3c1_29170 5.0kb upstream 5.0kb upstream 17016 true Chr01: 20768846-20785861 Physcomitrium patens
Pp3c1_29170 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20768846-20773845 Physcomitrium patens
Pp3c1_29170 5.0kb downstream 5.0kb downstream 17016 true Chr01: 20773846-20790861 Physcomitrium patens
Pp3c1_29170 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20785862-20790861 Physcomitrium patens
Pp3c1_29170 10.0kb upstream 10.0kb upstream 22016 true Chr01: 20763846-20785861 Physcomitrium patens
Pp3c1_29170 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20763846-20773845 Physcomitrium patens
Pp3c1_29170 10.0kb downstream 10.0kb downstream 22016 true Chr01: 20773846-20795861 Physcomitrium patens
Pp3c1_29170 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20785862-20795861 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348926 5274 Embryophyte View MSA
123427245 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.762        
cufflinks 0.486        
cufflinks 1.078        
cufflinks 1.182        
cufflinks 0.881        
cufflinks 0.18       Low
cufflinks 0.75        
cufflinks 0.414        
cufflinks 2.438       High
cufflinks 1.423        
cufflinks 1.59       High
cufflinks 0.629        
cufflinks 1.054        
cufflinks 1.613       High
cufflinks 2.239       High
cufflinks 0.89        
cufflinks 0.237       Low
cufflinks 0.627        
cufflinks 0.795        
cufflinks 0.957        
cufflinks 0.228       Low
cufflinks 1.429        
cufflinks 0.284       Low
cufflinks 0.245       Low
cufflinks 0.369        
cufflinks 1.405        
cufflinks 0.195       Low
cufflinks 0.842        
cufflinks 0.228       Low
cufflinks 0.637        

0 Strain