Gene : Pp3c1_26880 P. patens v3.3
Defline:  (1 of 1) 2.4.1.227 - Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase / Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase Genomic Order:  1272
Name:  ? Pp3c1_26880 Secondary Identifier:  ? PAC:32968992
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_26880 0.5kb upstream 0.5kb upstream 5016 true Chr01: 19446406-19451421 Physcomitrium patens
Pp3c1_26880 0.5kb upstream 0.5kb upstream 500 false Chr01: 19450922-19451421 Physcomitrium patens
Pp3c1_26880 0.5kb downstream 0.5kb downstream 5016 true Chr01: 19445906-19450921 Physcomitrium patens
Pp3c1_26880 0.5kb downstream 0.5kb downstream 500 false Chr01: 19445906-19446405 Physcomitrium patens
Pp3c1_26880 1.0kb upstream 1.0kb upstream 5516 true Chr01: 19446406-19451921 Physcomitrium patens
Pp3c1_26880 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19450922-19451921 Physcomitrium patens
Pp3c1_26880 1.0kb downstream 1.0kb downstream 5516 true Chr01: 19445406-19450921 Physcomitrium patens
Pp3c1_26880 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19445406-19446405 Physcomitrium patens
Pp3c1_26880 2.0kb upstream 2.0kb upstream 6516 true Chr01: 19446406-19452921 Physcomitrium patens
Pp3c1_26880 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19450922-19452921 Physcomitrium patens
Pp3c1_26880 2.0kb downstream 2.0kb downstream 6516 true Chr01: 19444406-19450921 Physcomitrium patens
Pp3c1_26880 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19444406-19446405 Physcomitrium patens
Pp3c1_26880 5.0kb upstream 5.0kb upstream 9516 true Chr01: 19446406-19455921 Physcomitrium patens
Pp3c1_26880 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19450922-19455921 Physcomitrium patens
Pp3c1_26880 5.0kb downstream 5.0kb downstream 9516 true Chr01: 19441406-19450921 Physcomitrium patens
Pp3c1_26880 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19441406-19446405 Physcomitrium patens
Pp3c1_26880 10.0kb upstream 10.0kb upstream 14516 true Chr01: 19446406-19460921 Physcomitrium patens
Pp3c1_26880 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19450922-19460921 Physcomitrium patens
Pp3c1_26880 10.0kb downstream 10.0kb downstream 14516 true Chr01: 19436406-19450921 Physcomitrium patens
Pp3c1_26880 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19436406-19446405 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346404 5274 Embryophyte View MSA
123426309 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.23        
cufflinks 0.147        
cufflinks 0.423       High
cufflinks 0.169        
cufflinks 0.27        
cufflinks 0.323        
cufflinks 0.141        
cufflinks 0.221        
cufflinks 0.236        
cufflinks 0.288        
cufflinks 0.228        
cufflinks 0.319        
cufflinks 0.205        
cufflinks 0.279        
cufflinks 0.167        
cufflinks 0.146        
cufflinks 0.356        
cufflinks 0.16        
cufflinks 0.23        
cufflinks 0.158        
cufflinks 0.139        
cufflinks 0.082     Low Low
cufflinks 0.016     Low Low
cufflinks 0.312        
cufflinks 0.31        
cufflinks 0.314        
cufflinks 0.025     Low Low
cufflinks 0.234        
cufflinks 0.186        
cufflinks 0.113        

0 Strain