Gene : Pp3c1_37850 P. patens v3.3
Defline:  (1 of 6) PTHR31087:SF11 - PROTEIN LURP-ONE-RELATED 1-RELATED Genomic Order:  1823
Name:  ? Pp3c1_37850 Secondary Identifier:  ? PAC:32970451
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_37850 0.5kb upstream 0.5kb upstream 2848 true Chr01: 26260074-26262921 Physcomitrium patens
Pp3c1_37850 0.5kb upstream 0.5kb upstream 500 false Chr01: 26262422-26262921 Physcomitrium patens
Pp3c1_37850 0.5kb downstream 0.5kb downstream 2848 true Chr01: 26259574-26262421 Physcomitrium patens
Pp3c1_37850 0.5kb downstream 0.5kb downstream 500 false Chr01: 26259574-26260073 Physcomitrium patens
Pp3c1_37850 1.0kb upstream 1.0kb upstream 3348 true Chr01: 26260074-26263421 Physcomitrium patens
Pp3c1_37850 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26262422-26263421 Physcomitrium patens
Pp3c1_37850 1.0kb downstream 1.0kb downstream 3348 true Chr01: 26259074-26262421 Physcomitrium patens
Pp3c1_37850 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26259074-26260073 Physcomitrium patens
Pp3c1_37850 2.0kb upstream 2.0kb upstream 4348 true Chr01: 26260074-26264421 Physcomitrium patens
Pp3c1_37850 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26262422-26264421 Physcomitrium patens
Pp3c1_37850 2.0kb downstream 2.0kb downstream 4348 true Chr01: 26258074-26262421 Physcomitrium patens
Pp3c1_37850 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26258074-26260073 Physcomitrium patens
Pp3c1_37850 5.0kb upstream 5.0kb upstream 7348 true Chr01: 26260074-26267421 Physcomitrium patens
Pp3c1_37850 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26262422-26267421 Physcomitrium patens
Pp3c1_37850 5.0kb downstream 5.0kb downstream 7348 true Chr01: 26255074-26262421 Physcomitrium patens
Pp3c1_37850 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26255074-26260073 Physcomitrium patens
Pp3c1_37850 10.0kb upstream 10.0kb upstream 12348 true Chr01: 26260074-26272421 Physcomitrium patens
Pp3c1_37850 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26262422-26272421 Physcomitrium patens
Pp3c1_37850 10.0kb downstream 10.0kb downstream 12348 true Chr01: 26250074-26262421 Physcomitrium patens
Pp3c1_37850 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26250074-26260073 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351653 5274 Embryophyte View MSA
123382260 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.238        
cufflinks 0.073     Low Low
cufflinks 0.137        
cufflinks 0.268        
cufflinks 2.297        
cufflinks 240.006     High High
cufflinks 0.489        
cufflinks 477.227     High High
cufflinks 0.058     Low Low
cufflinks 1339.92     High High
cufflinks 57.364     High High
cufflinks 0.055     Low Low
cufflinks 0.694        
cufflinks 1.035        
cufflinks 4.042        
cufflinks 10.638        
cufflinks 0.128        
cufflinks 0.402        
cufflinks 24.234     High  
cufflinks 0.678        
cufflinks 1347.73     High High
cufflinks 1.429        
cufflinks 0.05     Low Low
cufflinks 0.148        
cufflinks 5.029        
cufflinks 0.172        
cufflinks 0.097       Low
cufflinks 97.411     High High
cufflinks 0.5        
cufflinks 83.49     High High

0 Strain