Gene : Pp3c1_32830 P. patens v3.3
Genomic Order:  1568 Name:  ? Pp3c1_32830
Secondary Identifier:  ? PAC:32970701
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_32830 0.5kb upstream 0.5kb upstream 926 true Chr01: 23170385-23171310 Physcomitrium patens
Pp3c1_32830 0.5kb upstream 0.5kb upstream 500 false Chr01: 23170385-23170884 Physcomitrium patens
Pp3c1_32830 0.5kb downstream 0.5kb downstream 926 true Chr01: 23170885-23171810 Physcomitrium patens
Pp3c1_32830 0.5kb downstream 0.5kb downstream 500 false Chr01: 23171311-23171810 Physcomitrium patens
Pp3c1_32830 1.0kb upstream 1.0kb upstream 1426 true Chr01: 23169885-23171310 Physcomitrium patens
Pp3c1_32830 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23169885-23170884 Physcomitrium patens
Pp3c1_32830 1.0kb downstream 1.0kb downstream 1426 true Chr01: 23170885-23172310 Physcomitrium patens
Pp3c1_32830 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23171311-23172310 Physcomitrium patens
Pp3c1_32830 2.0kb upstream 2.0kb upstream 2426 true Chr01: 23168885-23171310 Physcomitrium patens
Pp3c1_32830 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23168885-23170884 Physcomitrium patens
Pp3c1_32830 2.0kb downstream 2.0kb downstream 2426 true Chr01: 23170885-23173310 Physcomitrium patens
Pp3c1_32830 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23171311-23173310 Physcomitrium patens
Pp3c1_32830 5.0kb upstream 5.0kb upstream 5426 true Chr01: 23165885-23171310 Physcomitrium patens
Pp3c1_32830 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23165885-23170884 Physcomitrium patens
Pp3c1_32830 5.0kb downstream 5.0kb downstream 5426 true Chr01: 23170885-23176310 Physcomitrium patens
Pp3c1_32830 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23171311-23176310 Physcomitrium patens
Pp3c1_32830 10.0kb upstream 10.0kb upstream 10426 true Chr01: 23160885-23171310 Physcomitrium patens
Pp3c1_32830 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23160885-23170884 Physcomitrium patens
Pp3c1_32830 10.0kb downstream 10.0kb downstream 10426 true Chr01: 23170885-23181310 Physcomitrium patens
Pp3c1_32830 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23171311-23181310 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121334175 5274 Embryophyte Singleton cluster - no MSA
123371056 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low High

0 Strain