Gene : Pp3c1_41830 P. patens v3.3
Defline:  (1 of 2) 2.1.1.100 - Protein-S-isoprenylcysteine O-methyltransferase / Prenylcysteine carboxyl methyltransferase Genomic Order:  1998
Name:  ? Pp3c1_41830 Secondary Identifier:  ? PAC:32967139
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_41830 0.5kb upstream 0.5kb upstream 3847 true Chr01: 29278964-29282810 Physcomitrium patens
Pp3c1_41830 0.5kb upstream 0.5kb upstream 500 false Chr01: 29282311-29282810 Physcomitrium patens
Pp3c1_41830 0.5kb downstream 0.5kb downstream 3847 true Chr01: 29278464-29282310 Physcomitrium patens
Pp3c1_41830 0.5kb downstream 0.5kb downstream 500 false Chr01: 29278464-29278963 Physcomitrium patens
Pp3c1_41830 1.0kb upstream 1.0kb upstream 4347 true Chr01: 29278964-29283310 Physcomitrium patens
Pp3c1_41830 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29282311-29283310 Physcomitrium patens
Pp3c1_41830 1.0kb downstream 1.0kb downstream 4347 true Chr01: 29277964-29282310 Physcomitrium patens
Pp3c1_41830 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29277964-29278963 Physcomitrium patens
Pp3c1_41830 2.0kb upstream 2.0kb upstream 5347 true Chr01: 29278964-29284310 Physcomitrium patens
Pp3c1_41830 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29282311-29284310 Physcomitrium patens
Pp3c1_41830 2.0kb downstream 2.0kb downstream 5347 true Chr01: 29276964-29282310 Physcomitrium patens
Pp3c1_41830 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29276964-29278963 Physcomitrium patens
Pp3c1_41830 5.0kb upstream 5.0kb upstream 8347 true Chr01: 29278964-29287310 Physcomitrium patens
Pp3c1_41830 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29282311-29287310 Physcomitrium patens
Pp3c1_41830 5.0kb downstream 5.0kb downstream 8347 true Chr01: 29273964-29282310 Physcomitrium patens
Pp3c1_41830 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29273964-29278963 Physcomitrium patens
Pp3c1_41830 10.0kb upstream 10.0kb upstream 13347 true Chr01: 29278964-29292310 Physcomitrium patens
Pp3c1_41830 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29282311-29292310 Physcomitrium patens
Pp3c1_41830 10.0kb downstream 10.0kb downstream 13347 true Chr01: 29268964-29282310 Physcomitrium patens
Pp3c1_41830 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29268964-29278963 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344289 5274 Embryophyte View MSA
123425491 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.434     High  
cufflinks 23.796     High  
cufflinks 75.508     High High
cufflinks 23.1     High  
cufflinks 9.306       Low
cufflinks 37.974     High  
cufflinks 74.711     High High
cufflinks 41.685     High  
cufflinks 34.784     High  
cufflinks 58.089     High  
cufflinks 51.785     High  
cufflinks 25.038     High  
cufflinks 39.042     High  
cufflinks 35.576     High  
cufflinks 54.302     High  
cufflinks 46.349     High  
cufflinks 42.375     High  
cufflinks 48.935     High  
cufflinks 68.173     High High
cufflinks 47.093     High  
cufflinks 44.337     High  
cufflinks 22.314     High  
cufflinks 44.518     High  
cufflinks 67.579     High High
cufflinks 8.301       Low
cufflinks 17.48     High Low
cufflinks 20.588     High Low
cufflinks 32.513     High  
cufflinks 42.955     High  
cufflinks 23.907     High  

0 Strain