Gene : Pp3c1_42820 P. patens v3.3
Defline:  (1 of 1) PTHR24089:SF388 - MITOCHONDRIAL ARGININE TRANSPORTER BAC1 Genomic Order:  2036
Name:  ? Pp3c1_42820 Secondary Identifier:  ? PAC:32971029
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_42820 0.5kb upstream 0.5kb upstream 5858 true Chr01: 29995683-30001540 Physcomitrium patens
Pp3c1_42820 0.5kb upstream 0.5kb upstream 500 false Chr01: 30001041-30001540 Physcomitrium patens
Pp3c1_42820 0.5kb downstream 0.5kb downstream 5858 true Chr01: 29995183-30001040 Physcomitrium patens
Pp3c1_42820 0.5kb downstream 0.5kb downstream 500 false Chr01: 29995183-29995682 Physcomitrium patens
Pp3c1_42820 1.0kb upstream 1.0kb upstream 6358 true Chr01: 29995683-30002040 Physcomitrium patens
Pp3c1_42820 1.0kb upstream 1.0kb upstream 1000 false Chr01: 30001041-30002040 Physcomitrium patens
Pp3c1_42820 1.0kb downstream 1.0kb downstream 6358 true Chr01: 29994683-30001040 Physcomitrium patens
Pp3c1_42820 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29994683-29995682 Physcomitrium patens
Pp3c1_42820 2.0kb upstream 2.0kb upstream 7358 true Chr01: 29995683-30003040 Physcomitrium patens
Pp3c1_42820 2.0kb upstream 2.0kb upstream 2000 false Chr01: 30001041-30003040 Physcomitrium patens
Pp3c1_42820 2.0kb downstream 2.0kb downstream 7358 true Chr01: 29993683-30001040 Physcomitrium patens
Pp3c1_42820 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29993683-29995682 Physcomitrium patens
Pp3c1_42820 5.0kb upstream 5.0kb upstream 10358 true Chr01: 29995683-30006040 Physcomitrium patens
Pp3c1_42820 5.0kb upstream 5.0kb upstream 5000 false Chr01: 30001041-30006040 Physcomitrium patens
Pp3c1_42820 5.0kb downstream 5.0kb downstream 10358 true Chr01: 29990683-30001040 Physcomitrium patens
Pp3c1_42820 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29990683-29995682 Physcomitrium patens
Pp3c1_42820 10.0kb upstream 10.0kb upstream 15358 true Chr01: 29995683-30011040 Physcomitrium patens
Pp3c1_42820 10.0kb upstream 10.0kb upstream 10000 false Chr01: 30001041-30011040 Physcomitrium patens
Pp3c1_42820 10.0kb downstream 10.0kb downstream 15358 true Chr01: 29985683-30001040 Physcomitrium patens
Pp3c1_42820 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29985683-29995682 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429077 5275 Viridiplantae View MSA
121346711 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.184     High Low
cufflinks 65.138     High  
cufflinks 76.711     High  
cufflinks 104.92     High  
cufflinks 61.407     High Low
cufflinks 78.416     High  
cufflinks 128.87     High  
cufflinks 174.278     High High
cufflinks 64.482     High Low
cufflinks 62.393     High Low
cufflinks 133.131     High High
cufflinks 48.177     High Low
cufflinks 125.969     High  
cufflinks 85.56     High  
cufflinks 68.04     High  
cufflinks 75.723     High  
cufflinks 80.788     High  
cufflinks 128.684     High  
cufflinks 71.724     High  
cufflinks 145.717     High High
cufflinks 90.947     High  
cufflinks 123.708     High  
cufflinks 153.714     High High
cufflinks 113.414     High  
cufflinks 75.172     High  
cufflinks 130.755     High High
cufflinks 139.294     High High
cufflinks 101.834     High  
cufflinks 120.254     High  
cufflinks 59.645     High Low

0 Strain