Gene : Pp3c2_15810 P. patens v3.3
Genomic Order:  787 Name:  ? Pp3c2_15810
Secondary Identifier:  ? PAC:32932690
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c2_15810 0.5kb upstream 0.5kb upstream 2417 true Chr02: 10702804-10705220 Physcomitrium patens
Pp3c2_15810 0.5kb upstream 0.5kb upstream 500 false Chr02: 10704721-10705220 Physcomitrium patens
Pp3c2_15810 0.5kb downstream 0.5kb downstream 2417 true Chr02: 10702304-10704720 Physcomitrium patens
Pp3c2_15810 0.5kb downstream 0.5kb downstream 500 false Chr02: 10702304-10702803 Physcomitrium patens
Pp3c2_15810 1.0kb upstream 1.0kb upstream 2917 true Chr02: 10702804-10705720 Physcomitrium patens
Pp3c2_15810 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10704721-10705720 Physcomitrium patens
Pp3c2_15810 1.0kb downstream 1.0kb downstream 2917 true Chr02: 10701804-10704720 Physcomitrium patens
Pp3c2_15810 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10701804-10702803 Physcomitrium patens
Pp3c2_15810 2.0kb upstream 2.0kb upstream 3917 true Chr02: 10702804-10706720 Physcomitrium patens
Pp3c2_15810 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10704721-10706720 Physcomitrium patens
Pp3c2_15810 2.0kb downstream 2.0kb downstream 3917 true Chr02: 10700804-10704720 Physcomitrium patens
Pp3c2_15810 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10700804-10702803 Physcomitrium patens
Pp3c2_15810 5.0kb upstream 5.0kb upstream 6917 true Chr02: 10702804-10709720 Physcomitrium patens
Pp3c2_15810 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10704721-10709720 Physcomitrium patens
Pp3c2_15810 5.0kb downstream 5.0kb downstream 6917 true Chr02: 10697804-10704720 Physcomitrium patens
Pp3c2_15810 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10697804-10702803 Physcomitrium patens
Pp3c2_15810 10.0kb upstream 10.0kb upstream 11917 true Chr02: 10702804-10714720 Physcomitrium patens
Pp3c2_15810 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10704721-10714720 Physcomitrium patens
Pp3c2_15810 10.0kb downstream 10.0kb downstream 11917 true Chr02: 10692804-10704720 Physcomitrium patens
Pp3c2_15810 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10692804-10702803 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121329247 5274 Embryophyte Singleton cluster - no MSA
123366239 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.322        
cufflinks 0.563        
cufflinks 0.121        
cufflinks 0.025     Low Low
cufflinks 0.965       High
cufflinks 0.025     Low Low
cufflinks 0.392        
cufflinks 0.121        
cufflinks 0.01     Low Low
cufflinks 0.264        
cufflinks 0.093        
cufflinks 0.744       High
cufflinks 0.738       High
cufflinks 0.484        
cufflinks 0.55        
cufflinks 0.28        
cufflinks 0.505        
cufflinks 0.022     Low Low
cufflinks 0.182        
cufflinks 0.06     Low  
cufflinks 0.57        
cufflinks 0.108        
cufflinks 0.527        
cufflinks 0.369        
cufflinks 0.021     Low Low
cufflinks 0.029     Low Low
cufflinks 0.206        
cufflinks 0.008     Low Low
cufflinks 0.107        
cufflinks 0.359        

0 Strain