Gene : Pp3c2_31610 P. patens v3.3
Genomic Order:  1573 Name:  ? Pp3c2_31610
Secondary Identifier:  ? PAC:32936197
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c2_31610 0.5kb upstream 0.5kb upstream 2789 true Chr02: 20985619-20988407 Physcomitrium patens
Pp3c2_31610 0.5kb upstream 0.5kb upstream 500 false Chr02: 20985619-20986118 Physcomitrium patens
Pp3c2_31610 0.5kb downstream 0.5kb downstream 2789 true Chr02: 20986119-20988907 Physcomitrium patens
Pp3c2_31610 0.5kb downstream 0.5kb downstream 500 false Chr02: 20988408-20988907 Physcomitrium patens
Pp3c2_31610 1.0kb upstream 1.0kb upstream 3289 true Chr02: 20985119-20988407 Physcomitrium patens
Pp3c2_31610 1.0kb upstream 1.0kb upstream 1000 false Chr02: 20985119-20986118 Physcomitrium patens
Pp3c2_31610 1.0kb downstream 1.0kb downstream 3289 true Chr02: 20986119-20989407 Physcomitrium patens
Pp3c2_31610 1.0kb downstream 1.0kb downstream 1000 false Chr02: 20988408-20989407 Physcomitrium patens
Pp3c2_31610 2.0kb upstream 2.0kb upstream 4289 true Chr02: 20984119-20988407 Physcomitrium patens
Pp3c2_31610 2.0kb upstream 2.0kb upstream 2000 false Chr02: 20984119-20986118 Physcomitrium patens
Pp3c2_31610 2.0kb downstream 2.0kb downstream 4289 true Chr02: 20986119-20990407 Physcomitrium patens
Pp3c2_31610 2.0kb downstream 2.0kb downstream 2000 false Chr02: 20988408-20990407 Physcomitrium patens
Pp3c2_31610 5.0kb upstream 5.0kb upstream 7289 true Chr02: 20981119-20988407 Physcomitrium patens
Pp3c2_31610 5.0kb upstream 5.0kb upstream 5000 false Chr02: 20981119-20986118 Physcomitrium patens
Pp3c2_31610 5.0kb downstream 5.0kb downstream 7289 true Chr02: 20986119-20993407 Physcomitrium patens
Pp3c2_31610 5.0kb downstream 5.0kb downstream 5000 false Chr02: 20988408-20993407 Physcomitrium patens
Pp3c2_31610 10.0kb upstream 10.0kb upstream 12289 true Chr02: 20976119-20988407 Physcomitrium patens
Pp3c2_31610 10.0kb upstream 10.0kb upstream 10000 false Chr02: 20976119-20986118 Physcomitrium patens
Pp3c2_31610 10.0kb downstream 10.0kb downstream 12289 true Chr02: 20986119-20998407 Physcomitrium patens
Pp3c2_31610 10.0kb downstream 10.0kb downstream 10000 false Chr02: 20988408-20998407 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345117 5274 Embryophyte View MSA
123380161 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 107.287     High  
cufflinks 166.879     High High
cufflinks 45.254     High Low
cufflinks 85.73     High  
cufflinks 188.976     High High
cufflinks 12.134       Low
cufflinks 79.403     High  
cufflinks 113.211     High  
cufflinks 67.307     High  
cufflinks 42.836     High Low
cufflinks 46.805     High  
cufflinks 80.113     High  
cufflinks 145.022     High  
cufflinks 105.466     High  
cufflinks 173.099     High High
cufflinks 94.896     High  
cufflinks 106.099     High  
cufflinks 92.718     High  
cufflinks 104.248     High  
cufflinks 131.861     High  
cufflinks 61.199     High  
cufflinks 126.925     High  
cufflinks 14.332     High Low
cufflinks 95.02     High  
cufflinks 164.782     High High
cufflinks 90.96     High  
cufflinks 109.616     High  
cufflinks 130.33     High  
cufflinks 62.083     High  
cufflinks 77.318     High  

0 Strain