Gene : Pp3c3_11210 P. patens v3.3
Defline:  (1 of 1) PTHR13355:SF12 - GCN5-RELATED N-ACETYLTRANSFERASE (GNAT) FAMILY PROTEIN Genomic Order:  498
Name:  ? Pp3c3_11210 Secondary Identifier:  ? PAC:32944651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_11210 0.5kb upstream 0.5kb upstream 2077 true Chr03: 7938280-7940356 Physcomitrium patens
Pp3c3_11210 0.5kb upstream 0.5kb upstream 500 false Chr03: 7939857-7940356 Physcomitrium patens
Pp3c3_11210 0.5kb downstream 0.5kb downstream 2077 true Chr03: 7937780-7939856 Physcomitrium patens
Pp3c3_11210 0.5kb downstream 0.5kb downstream 500 false Chr03: 7937780-7938279 Physcomitrium patens
Pp3c3_11210 1.0kb upstream 1.0kb upstream 2577 true Chr03: 7938280-7940856 Physcomitrium patens
Pp3c3_11210 1.0kb upstream 1.0kb upstream 1000 false Chr03: 7939857-7940856 Physcomitrium patens
Pp3c3_11210 1.0kb downstream 1.0kb downstream 2577 true Chr03: 7937280-7939856 Physcomitrium patens
Pp3c3_11210 1.0kb downstream 1.0kb downstream 1000 false Chr03: 7937280-7938279 Physcomitrium patens
Pp3c3_11210 2.0kb upstream 2.0kb upstream 3577 true Chr03: 7938280-7941856 Physcomitrium patens
Pp3c3_11210 2.0kb upstream 2.0kb upstream 2000 false Chr03: 7939857-7941856 Physcomitrium patens
Pp3c3_11210 2.0kb downstream 2.0kb downstream 3577 true Chr03: 7936280-7939856 Physcomitrium patens
Pp3c3_11210 2.0kb downstream 2.0kb downstream 2000 false Chr03: 7936280-7938279 Physcomitrium patens
Pp3c3_11210 5.0kb upstream 5.0kb upstream 6577 true Chr03: 7938280-7944856 Physcomitrium patens
Pp3c3_11210 5.0kb upstream 5.0kb upstream 5000 false Chr03: 7939857-7944856 Physcomitrium patens
Pp3c3_11210 5.0kb downstream 5.0kb downstream 6577 true Chr03: 7933280-7939856 Physcomitrium patens
Pp3c3_11210 5.0kb downstream 5.0kb downstream 5000 false Chr03: 7933280-7938279 Physcomitrium patens
Pp3c3_11210 10.0kb upstream 10.0kb upstream 11577 true Chr03: 7938280-7949856 Physcomitrium patens
Pp3c3_11210 10.0kb upstream 10.0kb upstream 10000 false Chr03: 7939857-7949856 Physcomitrium patens
Pp3c3_11210 10.0kb downstream 10.0kb downstream 11577 true Chr03: 7928280-7939856 Physcomitrium patens
Pp3c3_11210 10.0kb downstream 10.0kb downstream 10000 false Chr03: 7928280-7938279 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123428893 5275 Viridiplantae View MSA
121347611 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.24        
cufflinks 14.721        
cufflinks 6.119        
cufflinks 2.163        
cufflinks 2.91        
cufflinks 0.029     Low Low
cufflinks 2.887        
cufflinks 6.675        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.487        
cufflinks 11.39        
cufflinks 0.21       Low
cufflinks 7.879        
cufflinks 6.926        
cufflinks 0.389       Low
cufflinks 13.467        
cufflinks 3.714        
cufflinks 10.482        
cufflinks 4.933        
cufflinks 0.028     Low Low
cufflinks 4.926        
cufflinks 6.82        
cufflinks 3.868        
cufflinks 6.108        
cufflinks 4.861        
cufflinks 11.318        
cufflinks 1.014        
cufflinks 0.05     Low Low
cufflinks 0.237       Low
cufflinks 9.256        

0 Strain