Gene : Pp3c3_11140 P. patens v3.3
Defline:  (1 of 3) PTHR30314:SF12 - CELL DIVISION PROTEIN FTSZ HOMOLOG 1, CHLOROPLASTIC Genomic Order:  490
Name:  ? Pp3c3_11140 Secondary Identifier:  ? PAC:32941635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_11140 0.5kb upstream 0.5kb upstream 3937 true Chr03: 7886234-7890170 Physcomitrium patens
Pp3c3_11140 0.5kb upstream 0.5kb upstream 500 false Chr03: 7886234-7886733 Physcomitrium patens
Pp3c3_11140 0.5kb downstream 0.5kb downstream 3937 true Chr03: 7886734-7890670 Physcomitrium patens
Pp3c3_11140 0.5kb downstream 0.5kb downstream 500 false Chr03: 7890171-7890670 Physcomitrium patens
Pp3c3_11140 1.0kb upstream 1.0kb upstream 4437 true Chr03: 7885734-7890170 Physcomitrium patens
Pp3c3_11140 1.0kb upstream 1.0kb upstream 1000 false Chr03: 7885734-7886733 Physcomitrium patens
Pp3c3_11140 1.0kb downstream 1.0kb downstream 4437 true Chr03: 7886734-7891170 Physcomitrium patens
Pp3c3_11140 1.0kb downstream 1.0kb downstream 1000 false Chr03: 7890171-7891170 Physcomitrium patens
Pp3c3_11140 2.0kb upstream 2.0kb upstream 5437 true Chr03: 7884734-7890170 Physcomitrium patens
Pp3c3_11140 2.0kb upstream 2.0kb upstream 2000 false Chr03: 7884734-7886733 Physcomitrium patens
Pp3c3_11140 2.0kb downstream 2.0kb downstream 5437 true Chr03: 7886734-7892170 Physcomitrium patens
Pp3c3_11140 2.0kb downstream 2.0kb downstream 2000 false Chr03: 7890171-7892170 Physcomitrium patens
Pp3c3_11140 5.0kb upstream 5.0kb upstream 8437 true Chr03: 7881734-7890170 Physcomitrium patens
Pp3c3_11140 5.0kb upstream 5.0kb upstream 5000 false Chr03: 7881734-7886733 Physcomitrium patens
Pp3c3_11140 5.0kb downstream 5.0kb downstream 8437 true Chr03: 7886734-7895170 Physcomitrium patens
Pp3c3_11140 5.0kb downstream 5.0kb downstream 5000 false Chr03: 7890171-7895170 Physcomitrium patens
Pp3c3_11140 10.0kb upstream 10.0kb upstream 13437 true Chr03: 7876734-7890170 Physcomitrium patens
Pp3c3_11140 10.0kb upstream 10.0kb upstream 10000 false Chr03: 7876734-7886733 Physcomitrium patens
Pp3c3_11140 10.0kb downstream 10.0kb downstream 13437 true Chr03: 7886734-7900170 Physcomitrium patens
Pp3c3_11140 10.0kb downstream 10.0kb downstream 10000 false Chr03: 7890171-7900170 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343498 5274 Embryophyte View MSA
123379718 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.218        
cufflinks 7.761       High
cufflinks 3.884        
cufflinks 4.378        
cufflinks 4.262        
cufflinks 6.711       High
cufflinks 5.011        
cufflinks 5.483        
cufflinks 2.661       Low
cufflinks 2.128       Low
cufflinks 2.354       Low
cufflinks 3.787        
cufflinks 3.244        
cufflinks 5.568        
cufflinks 7.399       High
cufflinks 4.4        
cufflinks 4.826        
cufflinks 2.633       Low
cufflinks 6.24        
cufflinks 5.825        
cufflinks 1.927       Low
cufflinks 2.147       Low
cufflinks 7.089       High
cufflinks 3.776        
cufflinks 2.328       Low
cufflinks 5.922        
cufflinks 2.076       Low
cufflinks 3.801        
cufflinks 6.611       High
cufflinks 3.071        

0 Strain