Gene : Pp3c3_22810 P. patens v3.3
Genomic Order:  1055 Name:  ? Pp3c3_22810
Secondary Identifier:  ? PAC:32941453
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_22810 0.5kb upstream 0.5kb upstream 2486 true Chr03: 15658027-15660512 Physcomitrium patens
Pp3c3_22810 0.5kb upstream 0.5kb upstream 500 false Chr03: 15660013-15660512 Physcomitrium patens
Pp3c3_22810 0.5kb downstream 0.5kb downstream 2486 true Chr03: 15657527-15660012 Physcomitrium patens
Pp3c3_22810 0.5kb downstream 0.5kb downstream 500 false Chr03: 15657527-15658026 Physcomitrium patens
Pp3c3_22810 1.0kb upstream 1.0kb upstream 2986 true Chr03: 15658027-15661012 Physcomitrium patens
Pp3c3_22810 1.0kb upstream 1.0kb upstream 1000 false Chr03: 15660013-15661012 Physcomitrium patens
Pp3c3_22810 1.0kb downstream 1.0kb downstream 2986 true Chr03: 15657027-15660012 Physcomitrium patens
Pp3c3_22810 1.0kb downstream 1.0kb downstream 1000 false Chr03: 15657027-15658026 Physcomitrium patens
Pp3c3_22810 2.0kb upstream 2.0kb upstream 3986 true Chr03: 15658027-15662012 Physcomitrium patens
Pp3c3_22810 2.0kb upstream 2.0kb upstream 2000 false Chr03: 15660013-15662012 Physcomitrium patens
Pp3c3_22810 2.0kb downstream 2.0kb downstream 3986 true Chr03: 15656027-15660012 Physcomitrium patens
Pp3c3_22810 2.0kb downstream 2.0kb downstream 2000 false Chr03: 15656027-15658026 Physcomitrium patens
Pp3c3_22810 5.0kb upstream 5.0kb upstream 6986 true Chr03: 15658027-15665012 Physcomitrium patens
Pp3c3_22810 5.0kb upstream 5.0kb upstream 5000 false Chr03: 15660013-15665012 Physcomitrium patens
Pp3c3_22810 5.0kb downstream 5.0kb downstream 6986 true Chr03: 15653027-15660012 Physcomitrium patens
Pp3c3_22810 5.0kb downstream 5.0kb downstream 5000 false Chr03: 15653027-15658026 Physcomitrium patens
Pp3c3_22810 10.0kb upstream 10.0kb upstream 11986 true Chr03: 15658027-15670012 Physcomitrium patens
Pp3c3_22810 10.0kb upstream 10.0kb upstream 10000 false Chr03: 15660013-15670012 Physcomitrium patens
Pp3c3_22810 10.0kb downstream 10.0kb downstream 11986 true Chr03: 15648027-15660012 Physcomitrium patens
Pp3c3_22810 10.0kb downstream 10.0kb downstream 10000 false Chr03: 15648027-15658026 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342929 5274 Embryophyte View MSA
123379328 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.077     Low Low
cufflinks 2.85       High
cufflinks 0.147       Low
cufflinks 5.696       High
cufflinks 0.184        
cufflinks 0.213        
cufflinks 0.45        
cufflinks 1.869        
cufflinks 0.14       Low
cufflinks 0.454        
cufflinks 1.93        
cufflinks 0.362        
cufflinks 5.523       High
cufflinks 0.931        
cufflinks 0.371        
cufflinks 0.317        
cufflinks 1.606        
cufflinks 4.348       High
cufflinks 0.359        
cufflinks 0.445        
cufflinks 0.648        
cufflinks 0.23        
cufflinks 0.466        
cufflinks 0.719        
cufflinks 6.585       High
cufflinks 5.698       High
cufflinks 0.219        
cufflinks 0.089       Low
cufflinks 0.05     Low Low
cufflinks 0.74        

0 Strain