Gene : Pp3c3_29930 P. patens v3.3
Genomic Order:  1383 Name:  ? Pp3c3_29930
Secondary Identifier:  ? PAC:32940933
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_29930 0.5kb upstream 0.5kb upstream 5369 true Chr03: 20435719-20441087 Physcomitrium patens
Pp3c3_29930 0.5kb upstream 0.5kb upstream 500 false Chr03: 20435719-20436218 Physcomitrium patens
Pp3c3_29930 0.5kb downstream 0.5kb downstream 5369 true Chr03: 20436219-20441587 Physcomitrium patens
Pp3c3_29930 0.5kb downstream 0.5kb downstream 500 false Chr03: 20441088-20441587 Physcomitrium patens
Pp3c3_29930 1.0kb upstream 1.0kb upstream 5869 true Chr03: 20435219-20441087 Physcomitrium patens
Pp3c3_29930 1.0kb upstream 1.0kb upstream 1000 false Chr03: 20435219-20436218 Physcomitrium patens
Pp3c3_29930 1.0kb downstream 1.0kb downstream 5869 true Chr03: 20436219-20442087 Physcomitrium patens
Pp3c3_29930 1.0kb downstream 1.0kb downstream 1000 false Chr03: 20441088-20442087 Physcomitrium patens
Pp3c3_29930 2.0kb upstream 2.0kb upstream 6869 true Chr03: 20434219-20441087 Physcomitrium patens
Pp3c3_29930 2.0kb upstream 2.0kb upstream 2000 false Chr03: 20434219-20436218 Physcomitrium patens
Pp3c3_29930 2.0kb downstream 2.0kb downstream 6869 true Chr03: 20436219-20443087 Physcomitrium patens
Pp3c3_29930 2.0kb downstream 2.0kb downstream 2000 false Chr03: 20441088-20443087 Physcomitrium patens
Pp3c3_29930 5.0kb upstream 5.0kb upstream 9869 true Chr03: 20431219-20441087 Physcomitrium patens
Pp3c3_29930 5.0kb upstream 5.0kb upstream 5000 false Chr03: 20431219-20436218 Physcomitrium patens
Pp3c3_29930 5.0kb downstream 5.0kb downstream 9869 true Chr03: 20436219-20446087 Physcomitrium patens
Pp3c3_29930 5.0kb downstream 5.0kb downstream 5000 false Chr03: 20441088-20446087 Physcomitrium patens
Pp3c3_29930 10.0kb upstream 10.0kb upstream 14869 true Chr03: 20426219-20441087 Physcomitrium patens
Pp3c3_29930 10.0kb upstream 10.0kb upstream 10000 false Chr03: 20426219-20436218 Physcomitrium patens
Pp3c3_29930 10.0kb downstream 10.0kb downstream 14869 true Chr03: 20436219-20451087 Physcomitrium patens
Pp3c3_29930 10.0kb downstream 10.0kb downstream 10000 false Chr03: 20441088-20451087 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121330323 5274 Embryophyte Singleton cluster - no MSA
123427645 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.034     Low  
cufflinks 0.008     Low  
cufflinks 0.011     Low  
cufflinks 0.001     Low Low
cufflinks 0.051     Low High
cufflinks 0.038     Low  
cufflinks 0.029     Low  
cufflinks 0.001     Low Low
cufflinks 0.03     Low  
cufflinks 0.021     Low  
cufflinks 0.04     Low  
cufflinks 0.002     Low Low
cufflinks 0.026     Low  
cufflinks 0.047     Low High
cufflinks 0.013     Low  
cufflinks 0.005     Low  
cufflinks 0.045     Low High
cufflinks 0.016     Low  
cufflinks 0.006     Low  
cufflinks 0.039     Low  
cufflinks 0.05     Low High
cufflinks 0.008     Low  
cufflinks 0.013     Low  
cufflinks 0.004     Low Low
cufflinks 0.005     Low  
cufflinks 0.017     Low  
cufflinks 0.008     Low  
cufflinks 0.028     Low  
cufflinks 0.005     Low  
cufflinks 0.008     Low  

0 Strain