Gene : Pp3c3_27630 P. patens v3.3
Defline:  (1 of 3) 2.7.11.12 - cGMP-dependent protein kinase / PKG II Genomic Order:  1296
Name:  ? Pp3c3_27630 Secondary Identifier:  ? PAC:32944990
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_27630 0.5kb upstream 0.5kb upstream 7239 true Chr03: 18764488-18771726 Physcomitrium patens
Pp3c3_27630 0.5kb upstream 0.5kb upstream 500 false Chr03: 18771227-18771726 Physcomitrium patens
Pp3c3_27630 0.5kb downstream 0.5kb downstream 7239 true Chr03: 18763988-18771226 Physcomitrium patens
Pp3c3_27630 0.5kb downstream 0.5kb downstream 500 false Chr03: 18763988-18764487 Physcomitrium patens
Pp3c3_27630 1.0kb upstream 1.0kb upstream 7739 true Chr03: 18764488-18772226 Physcomitrium patens
Pp3c3_27630 1.0kb upstream 1.0kb upstream 1000 false Chr03: 18771227-18772226 Physcomitrium patens
Pp3c3_27630 1.0kb downstream 1.0kb downstream 7739 true Chr03: 18763488-18771226 Physcomitrium patens
Pp3c3_27630 1.0kb downstream 1.0kb downstream 1000 false Chr03: 18763488-18764487 Physcomitrium patens
Pp3c3_27630 2.0kb upstream 2.0kb upstream 8739 true Chr03: 18764488-18773226 Physcomitrium patens
Pp3c3_27630 2.0kb upstream 2.0kb upstream 2000 false Chr03: 18771227-18773226 Physcomitrium patens
Pp3c3_27630 2.0kb downstream 2.0kb downstream 8739 true Chr03: 18762488-18771226 Physcomitrium patens
Pp3c3_27630 2.0kb downstream 2.0kb downstream 2000 false Chr03: 18762488-18764487 Physcomitrium patens
Pp3c3_27630 5.0kb upstream 5.0kb upstream 11739 true Chr03: 18764488-18776226 Physcomitrium patens
Pp3c3_27630 5.0kb upstream 5.0kb upstream 5000 false Chr03: 18771227-18776226 Physcomitrium patens
Pp3c3_27630 5.0kb downstream 5.0kb downstream 11739 true Chr03: 18759488-18771226 Physcomitrium patens
Pp3c3_27630 5.0kb downstream 5.0kb downstream 5000 false Chr03: 18759488-18764487 Physcomitrium patens
Pp3c3_27630 10.0kb upstream 10.0kb upstream 16739 true Chr03: 18764488-18781226 Physcomitrium patens
Pp3c3_27630 10.0kb upstream 10.0kb upstream 10000 false Chr03: 18771227-18781226 Physcomitrium patens
Pp3c3_27630 10.0kb downstream 10.0kb downstream 16739 true Chr03: 18754488-18771226 Physcomitrium patens
Pp3c3_27630 10.0kb downstream 10.0kb downstream 10000 false Chr03: 18754488-18764487 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121330813 5274 Embryophyte Singleton cluster - no MSA
123427172 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.02     Low  
cufflinks 0.018     Low  
cufflinks 0.293       High
cufflinks 0.005     Low Low
cufflinks 0.027     Low  
cufflinks 0.003     Low Low
cufflinks 0.023     Low  
cufflinks 0.044     Low  
cufflinks 0.299       High
cufflinks 0.058     Low  
cufflinks 0.288       High
cufflinks 0.013     Low  
cufflinks 0.119        
cufflinks 0.042     Low  
cufflinks 0.028     Low  
cufflinks 0.05     Low  
cufflinks 1.251       High
cufflinks 0.024     Low  
cufflinks 0.012     Low Low
cufflinks 0.059     Low  
cufflinks 0.039     Low  
cufflinks 0.02     Low  
cufflinks 0.062     Low  
cufflinks 0.039     Low  
cufflinks 0.925       High
cufflinks 0.025     Low  
cufflinks 0.233       High
cufflinks 0.046     Low  
cufflinks 0.047     Low  
cufflinks 0.021     Low  

0 Strain