Gene : Pp3c3_36830 P. patens v3.3
Defline:  (1 of 3) PTHR15495:SF7 - GPI INOSITOL-DEACYLASE Genomic Order:  1735
Name:  ? Pp3c3_36830 Secondary Identifier:  ? PAC:32941313
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_36830 0.5kb upstream 0.5kb upstream 9821 true Chr03: 24676025-24685845 Physcomitrium patens
Pp3c3_36830 0.5kb upstream 0.5kb upstream 500 false Chr03: 24685346-24685845 Physcomitrium patens
Pp3c3_36830 0.5kb downstream 0.5kb downstream 9821 true Chr03: 24675525-24685345 Physcomitrium patens
Pp3c3_36830 0.5kb downstream 0.5kb downstream 500 false Chr03: 24675525-24676024 Physcomitrium patens
Pp3c3_36830 1.0kb upstream 1.0kb upstream 10321 true Chr03: 24676025-24686345 Physcomitrium patens
Pp3c3_36830 1.0kb upstream 1.0kb upstream 1000 false Chr03: 24685346-24686345 Physcomitrium patens
Pp3c3_36830 1.0kb downstream 1.0kb downstream 10321 true Chr03: 24675025-24685345 Physcomitrium patens
Pp3c3_36830 1.0kb downstream 1.0kb downstream 1000 false Chr03: 24675025-24676024 Physcomitrium patens
Pp3c3_36830 2.0kb upstream 2.0kb upstream 11321 true Chr03: 24676025-24687345 Physcomitrium patens
Pp3c3_36830 2.0kb upstream 2.0kb upstream 2000 false Chr03: 24685346-24687345 Physcomitrium patens
Pp3c3_36830 2.0kb downstream 2.0kb downstream 11321 true Chr03: 24674025-24685345 Physcomitrium patens
Pp3c3_36830 2.0kb downstream 2.0kb downstream 2000 false Chr03: 24674025-24676024 Physcomitrium patens
Pp3c3_36830 5.0kb upstream 5.0kb upstream 14321 true Chr03: 24676025-24690345 Physcomitrium patens
Pp3c3_36830 5.0kb upstream 5.0kb upstream 5000 false Chr03: 24685346-24690345 Physcomitrium patens
Pp3c3_36830 5.0kb downstream 5.0kb downstream 14321 true Chr03: 24671025-24685345 Physcomitrium patens
Pp3c3_36830 5.0kb downstream 5.0kb downstream 5000 false Chr03: 24671025-24676024 Physcomitrium patens
Pp3c3_36830 10.0kb upstream 10.0kb upstream 19321 true Chr03: 24676025-24695345 Physcomitrium patens
Pp3c3_36830 10.0kb upstream 10.0kb upstream 10000 false Chr03: 24685346-24695345 Physcomitrium patens
Pp3c3_36830 10.0kb downstream 10.0kb downstream 19321 true Chr03: 24666025-24685345 Physcomitrium patens
Pp3c3_36830 10.0kb downstream 10.0kb downstream 10000 false Chr03: 24666025-24676024 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345823 5274 Embryophyte View MSA
123380275 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.963       Low
cufflinks 1.817        
cufflinks 1.883        
cufflinks 2.051        
cufflinks 0.478       Low
cufflinks 1.766        
cufflinks 1.249        
cufflinks 1.801        
cufflinks 1.435        
cufflinks 1.591        
cufflinks 1.908        
cufflinks 2.593       High
cufflinks 1.749        
cufflinks 1.47        
cufflinks 1.28        
cufflinks 1.526        
cufflinks 0.734       Low
cufflinks 2.392       High
cufflinks 1.585        
cufflinks 1.261        
cufflinks 1.798        
cufflinks 1.577        
cufflinks 2.335       High
cufflinks 0.449       Low
cufflinks 1.567        
cufflinks 1.926        
cufflinks 1.75        
cufflinks 1.864        
cufflinks 1.83        
cufflinks 1.382        

0 Strain