Gene : Pp3c3_31810 P. patens v3.3
Defline:  (1 of 12) PTHR11945:SF154 - F2E2.20-RELATED Genomic Order:  1489
Name:  ? Pp3c3_31810 Secondary Identifier:  ? PAC:32942372
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_31810 0.5kb upstream 0.5kb upstream 6664 true Chr03: 21583139-21589802 Physcomitrium patens
Pp3c3_31810 0.5kb upstream 0.5kb upstream 500 false Chr03: 21589303-21589802 Physcomitrium patens
Pp3c3_31810 0.5kb downstream 0.5kb downstream 6664 true Chr03: 21582639-21589302 Physcomitrium patens
Pp3c3_31810 0.5kb downstream 0.5kb downstream 500 false Chr03: 21582639-21583138 Physcomitrium patens
Pp3c3_31810 1.0kb upstream 1.0kb upstream 7164 true Chr03: 21583139-21590302 Physcomitrium patens
Pp3c3_31810 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21589303-21590302 Physcomitrium patens
Pp3c3_31810 1.0kb downstream 1.0kb downstream 7164 true Chr03: 21582139-21589302 Physcomitrium patens
Pp3c3_31810 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21582139-21583138 Physcomitrium patens
Pp3c3_31810 2.0kb upstream 2.0kb upstream 8164 true Chr03: 21583139-21591302 Physcomitrium patens
Pp3c3_31810 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21589303-21591302 Physcomitrium patens
Pp3c3_31810 2.0kb downstream 2.0kb downstream 8164 true Chr03: 21581139-21589302 Physcomitrium patens
Pp3c3_31810 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21581139-21583138 Physcomitrium patens
Pp3c3_31810 5.0kb upstream 5.0kb upstream 11164 true Chr03: 21583139-21594302 Physcomitrium patens
Pp3c3_31810 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21589303-21594302 Physcomitrium patens
Pp3c3_31810 5.0kb downstream 5.0kb downstream 11164 true Chr03: 21578139-21589302 Physcomitrium patens
Pp3c3_31810 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21578139-21583138 Physcomitrium patens
Pp3c3_31810 10.0kb upstream 10.0kb upstream 16164 true Chr03: 21583139-21599302 Physcomitrium patens
Pp3c3_31810 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21589303-21599302 Physcomitrium patens
Pp3c3_31810 10.0kb downstream 10.0kb downstream 16164 true Chr03: 21573139-21589302 Physcomitrium patens
Pp3c3_31810 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21573139-21583138 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.314        
cufflinks 0.631        
cufflinks 0.493        
cufflinks 0.701       High
cufflinks 0.29        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.155        
cufflinks 0.616        
cufflinks 0.03     Low Low
cufflinks 0.18        
cufflinks 0.003     Low Low
cufflinks 0.121        
cufflinks 0.014     Low Low
cufflinks 0.066     Low  
cufflinks 0.182        
cufflinks 0.052     Low  
cufflinks 0.347        
cufflinks 0.683       High
cufflinks 0.369        
cufflinks 0.491        
cufflinks 0.11        
cufflinks 0.241        
cufflinks 0.044     Low Low
cufflinks 1.074       High
cufflinks 0.19        
cufflinks 0.528        
cufflinks 0.181        
cufflinks 0.064     Low  
cufflinks 0.268        
cufflinks 0.333        

0 Strain