Gene : Pp3c3_31550 P. patens v3.3
Defline:  (1 of 4) 3.1.1.47 - 1-alkyl-2-acetylglycerophosphocholine esterase / Platelet-activating factor acetylhydrolase Genomic Order:  1473
Name:  ? Pp3c3_31550 Secondary Identifier:  ? PAC:32940336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_31550 0.5kb upstream 0.5kb upstream 3888 true Chr03: 21430833-21434720 Physcomitrium patens
Pp3c3_31550 0.5kb upstream 0.5kb upstream 500 false Chr03: 21434221-21434720 Physcomitrium patens
Pp3c3_31550 0.5kb downstream 0.5kb downstream 3888 true Chr03: 21430333-21434220 Physcomitrium patens
Pp3c3_31550 0.5kb downstream 0.5kb downstream 500 false Chr03: 21430333-21430832 Physcomitrium patens
Pp3c3_31550 1.0kb upstream 1.0kb upstream 4388 true Chr03: 21430833-21435220 Physcomitrium patens
Pp3c3_31550 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21434221-21435220 Physcomitrium patens
Pp3c3_31550 1.0kb downstream 1.0kb downstream 4388 true Chr03: 21429833-21434220 Physcomitrium patens
Pp3c3_31550 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21429833-21430832 Physcomitrium patens
Pp3c3_31550 2.0kb upstream 2.0kb upstream 5388 true Chr03: 21430833-21436220 Physcomitrium patens
Pp3c3_31550 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21434221-21436220 Physcomitrium patens
Pp3c3_31550 2.0kb downstream 2.0kb downstream 5388 true Chr03: 21428833-21434220 Physcomitrium patens
Pp3c3_31550 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21428833-21430832 Physcomitrium patens
Pp3c3_31550 5.0kb upstream 5.0kb upstream 8388 true Chr03: 21430833-21439220 Physcomitrium patens
Pp3c3_31550 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21434221-21439220 Physcomitrium patens
Pp3c3_31550 5.0kb downstream 5.0kb downstream 8388 true Chr03: 21425833-21434220 Physcomitrium patens
Pp3c3_31550 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21425833-21430832 Physcomitrium patens
Pp3c3_31550 10.0kb upstream 10.0kb upstream 13388 true Chr03: 21430833-21444220 Physcomitrium patens
Pp3c3_31550 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21434221-21444220 Physcomitrium patens
Pp3c3_31550 10.0kb downstream 10.0kb downstream 13388 true Chr03: 21420833-21434220 Physcomitrium patens
Pp3c3_31550 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21420833-21430832 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342903 5274 Embryophyte View MSA
123379311 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low High
cufflinks 0.037     Low  
cufflinks 0.002     Low Low
cufflinks 0.09     Low High
cufflinks 0.044     Low High
cufflinks 0.009     Low  
cufflinks 0.116       High
cufflinks 0.029     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low High
cufflinks 0.005     Low  
cufflinks 0.003     Low  
cufflinks 0.008     Low  
cufflinks 0.015     Low  
cufflinks 0.024     Low  
cufflinks 0.004     Low  
cufflinks 0.013     Low  
cufflinks 0.01     Low  
cufflinks 0.012     Low  
cufflinks 0.048     Low High
cufflinks 0.001     Low Low
cufflinks 0.004     Low  
cufflinks 0.001     Low Low
cufflinks 0.072     Low High
cufflinks 0.006     Low  

0 Strain