Gene : Pp3c3_32530 P. patens v3.3
Genomic Order:  1525 Name:  ? Pp3c3_32530
Secondary Identifier:  ? PAC:32944597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_32530 0.5kb upstream 0.5kb upstream 3437 true Chr03: 22065514-22068950 Physcomitrium patens
Pp3c3_32530 0.5kb upstream 0.5kb upstream 500 false Chr03: 22065514-22066013 Physcomitrium patens
Pp3c3_32530 0.5kb downstream 0.5kb downstream 3437 true Chr03: 22066014-22069450 Physcomitrium patens
Pp3c3_32530 0.5kb downstream 0.5kb downstream 500 false Chr03: 22068951-22069450 Physcomitrium patens
Pp3c3_32530 1.0kb upstream 1.0kb upstream 3937 true Chr03: 22065014-22068950 Physcomitrium patens
Pp3c3_32530 1.0kb upstream 1.0kb upstream 1000 false Chr03: 22065014-22066013 Physcomitrium patens
Pp3c3_32530 1.0kb downstream 1.0kb downstream 3937 true Chr03: 22066014-22069950 Physcomitrium patens
Pp3c3_32530 1.0kb downstream 1.0kb downstream 1000 false Chr03: 22068951-22069950 Physcomitrium patens
Pp3c3_32530 2.0kb upstream 2.0kb upstream 4937 true Chr03: 22064014-22068950 Physcomitrium patens
Pp3c3_32530 2.0kb upstream 2.0kb upstream 2000 false Chr03: 22064014-22066013 Physcomitrium patens
Pp3c3_32530 2.0kb downstream 2.0kb downstream 4937 true Chr03: 22066014-22070950 Physcomitrium patens
Pp3c3_32530 2.0kb downstream 2.0kb downstream 2000 false Chr03: 22068951-22070950 Physcomitrium patens
Pp3c3_32530 5.0kb upstream 5.0kb upstream 7937 true Chr03: 22061014-22068950 Physcomitrium patens
Pp3c3_32530 5.0kb upstream 5.0kb upstream 5000 false Chr03: 22061014-22066013 Physcomitrium patens
Pp3c3_32530 5.0kb downstream 5.0kb downstream 7937 true Chr03: 22066014-22073950 Physcomitrium patens
Pp3c3_32530 5.0kb downstream 5.0kb downstream 5000 false Chr03: 22068951-22073950 Physcomitrium patens
Pp3c3_32530 10.0kb upstream 10.0kb upstream 12937 true Chr03: 22056014-22068950 Physcomitrium patens
Pp3c3_32530 10.0kb upstream 10.0kb upstream 10000 false Chr03: 22056014-22066013 Physcomitrium patens
Pp3c3_32530 10.0kb downstream 10.0kb downstream 12937 true Chr03: 22066014-22078950 Physcomitrium patens
Pp3c3_32530 10.0kb downstream 10.0kb downstream 10000 false Chr03: 22068951-22078950 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345481 5274 Embryophyte View MSA
123380226 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.462        
cufflinks 0.484        
cufflinks 0.327        
cufflinks 0.764        
cufflinks 0.874       High
cufflinks 0.257       Low
cufflinks 0.569        
cufflinks 0.106       Low
cufflinks 0.465        
cufflinks 0.842       High
cufflinks 0.518        
cufflinks 1.014       High
cufflinks 0.751        
cufflinks 0.113       Low
cufflinks 0.714        
cufflinks 0.325        
cufflinks 0.389        
cufflinks 0.432        
cufflinks 0.393        
cufflinks 0.235       Low
cufflinks 0.619        
cufflinks 0.806        
cufflinks 0.392        
cufflinks 0.563        
cufflinks 0.562        
cufflinks 0.455        
cufflinks 0.34        
cufflinks 0.253       Low
cufflinks 0.339        
cufflinks 1.447       High

0 Strain