Gene : Pp3c3_9760 P. patens v3.3
Defline:  (1 of 1) PTHR14428 - NUCLEOLAR COMPLEX PROTEIN 3 Genomic Order:  408
Name:  ? Pp3c3_9760 Secondary Identifier:  ? PAC:32945021
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_9760 0.5kb upstream 0.5kb upstream 6909 true Chr03: 6971790-6978698 Physcomitrium patens
Pp3c3_9760 0.5kb upstream 0.5kb upstream 500 false Chr03: 6978199-6978698 Physcomitrium patens
Pp3c3_9760 0.5kb downstream 0.5kb downstream 6909 true Chr03: 6971290-6978198 Physcomitrium patens
Pp3c3_9760 0.5kb downstream 0.5kb downstream 500 false Chr03: 6971290-6971789 Physcomitrium patens
Pp3c3_9760 1.0kb upstream 1.0kb upstream 7409 true Chr03: 6971790-6979198 Physcomitrium patens
Pp3c3_9760 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6978199-6979198 Physcomitrium patens
Pp3c3_9760 1.0kb downstream 1.0kb downstream 7409 true Chr03: 6970790-6978198 Physcomitrium patens
Pp3c3_9760 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6970790-6971789 Physcomitrium patens
Pp3c3_9760 2.0kb upstream 2.0kb upstream 8409 true Chr03: 6971790-6980198 Physcomitrium patens
Pp3c3_9760 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6978199-6980198 Physcomitrium patens
Pp3c3_9760 2.0kb downstream 2.0kb downstream 8409 true Chr03: 6969790-6978198 Physcomitrium patens
Pp3c3_9760 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6969790-6971789 Physcomitrium patens
Pp3c3_9760 5.0kb upstream 5.0kb upstream 11409 true Chr03: 6971790-6983198 Physcomitrium patens
Pp3c3_9760 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6978199-6983198 Physcomitrium patens
Pp3c3_9760 5.0kb downstream 5.0kb downstream 11409 true Chr03: 6966790-6978198 Physcomitrium patens
Pp3c3_9760 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6966790-6971789 Physcomitrium patens
Pp3c3_9760 10.0kb upstream 10.0kb upstream 16409 true Chr03: 6971790-6988198 Physcomitrium patens
Pp3c3_9760 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6978199-6988198 Physcomitrium patens
Pp3c3_9760 10.0kb downstream 10.0kb downstream 16409 true Chr03: 6961790-6978198 Physcomitrium patens
Pp3c3_9760 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6961790-6971789 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346572 5274 Embryophyte View MSA
123424637 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.497       Low
cufflinks 1.367        
cufflinks 2.185       High
cufflinks 0.978        
cufflinks 0.207       Low
cufflinks 1.11        
cufflinks 1.6        
cufflinks 1.337        
cufflinks 1.147        
cufflinks 0.64        
cufflinks 0.267       Low
cufflinks 0.837        
cufflinks 0.623        
cufflinks 1.379        
cufflinks 0.632        
cufflinks 1.898       High
cufflinks 1.249        
cufflinks 1.508        
cufflinks 1.862       High
cufflinks 0.834        
cufflinks 1.69        
cufflinks 1.679        
cufflinks 2.218       High
cufflinks 1.657        
cufflinks 0.857        
cufflinks 1.037        
cufflinks 1.487        
cufflinks 1.497        
cufflinks 0.314       Low
cufflinks 0.676        

0 Strain