Gene : Pp3c3_37370 P. patens v3.3
Defline:  (1 of 1) KOG4657 - Uncharacterized conserved protein Genomic Order:  1764
Name:  ? Pp3c3_37370 Secondary Identifier:  ? PAC:32941203
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_37370 0.5kb upstream 0.5kb upstream 3571 true Chr03: 25026735-25030305 Physcomitrium patens
Pp3c3_37370 0.5kb upstream 0.5kb upstream 500 false Chr03: 25029806-25030305 Physcomitrium patens
Pp3c3_37370 0.5kb downstream 0.5kb downstream 3571 true Chr03: 25026235-25029805 Physcomitrium patens
Pp3c3_37370 0.5kb downstream 0.5kb downstream 500 false Chr03: 25026235-25026734 Physcomitrium patens
Pp3c3_37370 1.0kb upstream 1.0kb upstream 4071 true Chr03: 25026735-25030805 Physcomitrium patens
Pp3c3_37370 1.0kb upstream 1.0kb upstream 1000 false Chr03: 25029806-25030805 Physcomitrium patens
Pp3c3_37370 1.0kb downstream 1.0kb downstream 4071 true Chr03: 25025735-25029805 Physcomitrium patens
Pp3c3_37370 1.0kb downstream 1.0kb downstream 1000 false Chr03: 25025735-25026734 Physcomitrium patens
Pp3c3_37370 2.0kb upstream 2.0kb upstream 5071 true Chr03: 25026735-25031805 Physcomitrium patens
Pp3c3_37370 2.0kb upstream 2.0kb upstream 2000 false Chr03: 25029806-25031805 Physcomitrium patens
Pp3c3_37370 2.0kb downstream 2.0kb downstream 5071 true Chr03: 25024735-25029805 Physcomitrium patens
Pp3c3_37370 2.0kb downstream 2.0kb downstream 2000 false Chr03: 25024735-25026734 Physcomitrium patens
Pp3c3_37370 5.0kb upstream 5.0kb upstream 8071 true Chr03: 25026735-25034805 Physcomitrium patens
Pp3c3_37370 5.0kb upstream 5.0kb upstream 5000 false Chr03: 25029806-25034805 Physcomitrium patens
Pp3c3_37370 5.0kb downstream 5.0kb downstream 8071 true Chr03: 25021735-25029805 Physcomitrium patens
Pp3c3_37370 5.0kb downstream 5.0kb downstream 5000 false Chr03: 25021735-25026734 Physcomitrium patens
Pp3c3_37370 10.0kb upstream 10.0kb upstream 13071 true Chr03: 25026735-25039805 Physcomitrium patens
Pp3c3_37370 10.0kb upstream 10.0kb upstream 10000 false Chr03: 25029806-25039805 Physcomitrium patens
Pp3c3_37370 10.0kb downstream 10.0kb downstream 13071 true Chr03: 25016735-25029805 Physcomitrium patens
Pp3c3_37370 10.0kb downstream 10.0kb downstream 10000 false Chr03: 25016735-25026734 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348266 5274 Embryophyte View MSA
123424992 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.747        
cufflinks 0.556        
cufflinks 0.196       Low
cufflinks 0.475        
cufflinks 1.057        
cufflinks 0.214       Low
cufflinks 0.991        
cufflinks 0.756        
cufflinks 0.849        
cufflinks 0.146       Low
cufflinks 0.378        
cufflinks 0.25       Low
cufflinks 1.08       High
cufflinks 0.423        
cufflinks 1.257       High
cufflinks 1.048        
cufflinks 1.173       High
cufflinks 0.882        
cufflinks 0.733        
cufflinks 0.188       Low
cufflinks 0.607        
cufflinks 0.832        
cufflinks 1.177       High
cufflinks 0.573        
cufflinks 0.662        
cufflinks 0.864        
cufflinks 0.161       Low
cufflinks 0.421        
cufflinks 0.277       Low
cufflinks 0.554        

0 Strain