Gene : Pp3c4_15840 P. patens v3.3
Genomic Order:  742 Name:  ? Pp3c4_15840
Secondary Identifier:  ? PAC:32922257
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_15840 0.5kb upstream 0.5kb upstream 5771 true Chr04: 10976952-10982722 Physcomitrium patens
Pp3c4_15840 0.5kb upstream 0.5kb upstream 500 false Chr04: 10976952-10977451 Physcomitrium patens
Pp3c4_15840 0.5kb downstream 0.5kb downstream 5771 true Chr04: 10977452-10983222 Physcomitrium patens
Pp3c4_15840 0.5kb downstream 0.5kb downstream 500 false Chr04: 10982723-10983222 Physcomitrium patens
Pp3c4_15840 1.0kb upstream 1.0kb upstream 6271 true Chr04: 10976452-10982722 Physcomitrium patens
Pp3c4_15840 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10976452-10977451 Physcomitrium patens
Pp3c4_15840 1.0kb downstream 1.0kb downstream 6271 true Chr04: 10977452-10983722 Physcomitrium patens
Pp3c4_15840 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10982723-10983722 Physcomitrium patens
Pp3c4_15840 2.0kb upstream 2.0kb upstream 7271 true Chr04: 10975452-10982722 Physcomitrium patens
Pp3c4_15840 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10975452-10977451 Physcomitrium patens
Pp3c4_15840 2.0kb downstream 2.0kb downstream 7271 true Chr04: 10977452-10984722 Physcomitrium patens
Pp3c4_15840 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10982723-10984722 Physcomitrium patens
Pp3c4_15840 5.0kb upstream 5.0kb upstream 10271 true Chr04: 10972452-10982722 Physcomitrium patens
Pp3c4_15840 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10972452-10977451 Physcomitrium patens
Pp3c4_15840 5.0kb downstream 5.0kb downstream 10271 true Chr04: 10977452-10987722 Physcomitrium patens
Pp3c4_15840 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10982723-10987722 Physcomitrium patens
Pp3c4_15840 10.0kb upstream 10.0kb upstream 15271 true Chr04: 10967452-10982722 Physcomitrium patens
Pp3c4_15840 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10967452-10977451 Physcomitrium patens
Pp3c4_15840 10.0kb downstream 10.0kb downstream 15271 true Chr04: 10977452-10992722 Physcomitrium patens
Pp3c4_15840 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10982723-10992722 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342929 5274 Embryophyte View MSA
123379328 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.324        
cufflinks 6.084       High
cufflinks 0.1        
cufflinks 0.524        
cufflinks 0.175        
cufflinks 0.033     Low  
cufflinks 1.294        
cufflinks 0.083     Low  
cufflinks 0.014     Low Low
cufflinks 46.497     High High
cufflinks 0.134        
cufflinks 0.143        
cufflinks 0.014     Low Low
cufflinks 6.424       High
cufflinks 0.119        
cufflinks 0.015     Low Low
cufflinks 0.232        
cufflinks 73.771     High High
cufflinks 0.203        
cufflinks 28.895     High High
cufflinks 80.001     High High
cufflinks 1.099        
cufflinks 0.136        
cufflinks 4.226        
cufflinks 0.12        
cufflinks 0.965        
cufflinks 0.03     Low Low
cufflinks 0.126        
cufflinks 0.064     Low  
cufflinks 0.098        

0 Strain