Gene : Pp3c4_16470 P. patens v3.3
Defline:  (1 of 2) PF02816 - Alpha-kinase family (Alpha_kinase) Genomic Order:  776
Name:  ? Pp3c4_16470 Secondary Identifier:  ? PAC:32920780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_16470 0.5kb upstream 0.5kb upstream 7218 true Chr04: 11369752-11376969 Physcomitrium patens
Pp3c4_16470 0.5kb upstream 0.5kb upstream 500 false Chr04: 11369752-11370251 Physcomitrium patens
Pp3c4_16470 0.5kb downstream 0.5kb downstream 7218 true Chr04: 11370252-11377469 Physcomitrium patens
Pp3c4_16470 0.5kb downstream 0.5kb downstream 500 false Chr04: 11376970-11377469 Physcomitrium patens
Pp3c4_16470 1.0kb upstream 1.0kb upstream 7718 true Chr04: 11369252-11376969 Physcomitrium patens
Pp3c4_16470 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11369252-11370251 Physcomitrium patens
Pp3c4_16470 1.0kb downstream 1.0kb downstream 7718 true Chr04: 11370252-11377969 Physcomitrium patens
Pp3c4_16470 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11376970-11377969 Physcomitrium patens
Pp3c4_16470 2.0kb upstream 2.0kb upstream 8718 true Chr04: 11368252-11376969 Physcomitrium patens
Pp3c4_16470 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11368252-11370251 Physcomitrium patens
Pp3c4_16470 2.0kb downstream 2.0kb downstream 8718 true Chr04: 11370252-11378969 Physcomitrium patens
Pp3c4_16470 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11376970-11378969 Physcomitrium patens
Pp3c4_16470 5.0kb upstream 5.0kb upstream 11718 true Chr04: 11365252-11376969 Physcomitrium patens
Pp3c4_16470 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11365252-11370251 Physcomitrium patens
Pp3c4_16470 5.0kb downstream 5.0kb downstream 11718 true Chr04: 11370252-11381969 Physcomitrium patens
Pp3c4_16470 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11376970-11381969 Physcomitrium patens
Pp3c4_16470 10.0kb upstream 10.0kb upstream 16718 true Chr04: 11360252-11376969 Physcomitrium patens
Pp3c4_16470 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11360252-11370251 Physcomitrium patens
Pp3c4_16470 10.0kb downstream 10.0kb downstream 16718 true Chr04: 11370252-11386969 Physcomitrium patens
Pp3c4_16470 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11376970-11386969 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121336888 5274 Embryophyte View MSA
123373691 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.911        
cufflinks 1.881       High
cufflinks 0.056     Low Low
cufflinks 1.225        
cufflinks 2.943       High
cufflinks 0.061     Low Low
cufflinks 0.298        
cufflinks 0.154        
cufflinks 4.728       High
cufflinks 0.526        
cufflinks 0.232        
cufflinks 0.686        
cufflinks 0.219        
cufflinks 0.076     Low Low
cufflinks 0.135        
cufflinks 0.046     Low Low
cufflinks 0.186        
cufflinks 0.124        
cufflinks 0.086     Low  
cufflinks 0.684        
cufflinks 0.192        
cufflinks 15.087     High High
cufflinks 0.267        
cufflinks 0.169        
cufflinks 12.661     High High
cufflinks 0.699        
cufflinks 0.096        
cufflinks 0.758        
cufflinks 1.366        
cufflinks 0.229        

0 Strain