Gene : Pp3c4_19960 P. patens v3.3
Defline:  (1 of 2) PTHR10721 - MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44 Genomic Order:  940
Name:  ? Pp3c4_19960 Secondary Identifier:  ? PAC:32921648
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_19960 0.5kb upstream 0.5kb upstream 4936 true Chr04: 13490769-13495704 Physcomitrium patens
Pp3c4_19960 0.5kb upstream 0.5kb upstream 500 false Chr04: 13490769-13491268 Physcomitrium patens
Pp3c4_19960 0.5kb downstream 0.5kb downstream 4936 true Chr04: 13491269-13496204 Physcomitrium patens
Pp3c4_19960 0.5kb downstream 0.5kb downstream 500 false Chr04: 13495705-13496204 Physcomitrium patens
Pp3c4_19960 1.0kb upstream 1.0kb upstream 5436 true Chr04: 13490269-13495704 Physcomitrium patens
Pp3c4_19960 1.0kb upstream 1.0kb upstream 1000 false Chr04: 13490269-13491268 Physcomitrium patens
Pp3c4_19960 1.0kb downstream 1.0kb downstream 5436 true Chr04: 13491269-13496704 Physcomitrium patens
Pp3c4_19960 1.0kb downstream 1.0kb downstream 1000 false Chr04: 13495705-13496704 Physcomitrium patens
Pp3c4_19960 2.0kb upstream 2.0kb upstream 6436 true Chr04: 13489269-13495704 Physcomitrium patens
Pp3c4_19960 2.0kb upstream 2.0kb upstream 2000 false Chr04: 13489269-13491268 Physcomitrium patens
Pp3c4_19960 2.0kb downstream 2.0kb downstream 6436 true Chr04: 13491269-13497704 Physcomitrium patens
Pp3c4_19960 2.0kb downstream 2.0kb downstream 2000 false Chr04: 13495705-13497704 Physcomitrium patens
Pp3c4_19960 5.0kb upstream 5.0kb upstream 9436 true Chr04: 13486269-13495704 Physcomitrium patens
Pp3c4_19960 5.0kb upstream 5.0kb upstream 5000 false Chr04: 13486269-13491268 Physcomitrium patens
Pp3c4_19960 5.0kb downstream 5.0kb downstream 9436 true Chr04: 13491269-13500704 Physcomitrium patens
Pp3c4_19960 5.0kb downstream 5.0kb downstream 5000 false Chr04: 13495705-13500704 Physcomitrium patens
Pp3c4_19960 10.0kb upstream 10.0kb upstream 14436 true Chr04: 13481269-13495704 Physcomitrium patens
Pp3c4_19960 10.0kb upstream 10.0kb upstream 10000 false Chr04: 13481269-13491268 Physcomitrium patens
Pp3c4_19960 10.0kb downstream 10.0kb downstream 14436 true Chr04: 13491269-13505704 Physcomitrium patens
Pp3c4_19960 10.0kb downstream 10.0kb downstream 10000 false Chr04: 13495705-13505704 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345334 5274 Embryophyte View MSA
123424453 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.051       Low
cufflinks 1.632        
cufflinks 1.025       Low
cufflinks 3.457       High
cufflinks 1.264        
cufflinks 2.663       High
cufflinks 1.745        
cufflinks 1.877        
cufflinks 2.077        
cufflinks 1.557        
cufflinks 2.214        
cufflinks 1.653        
cufflinks 1.541        
cufflinks 1.674        
cufflinks 0.832       Low
cufflinks 1.21        
cufflinks 1.615        
cufflinks 1.977        
cufflinks 1.601        
cufflinks 2.284        
cufflinks 1.659        
cufflinks 0.735       Low
cufflinks 1.711        
cufflinks 1.589        
cufflinks 2.255        
cufflinks 2.177        
cufflinks 1.946        
cufflinks 2.612       High
cufflinks 1.014       Low
cufflinks 1.327        

0 Strain