Gene : Pp3c4_17360 P. patens v3.3
Defline:  (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754) Genomic Order:  827
Name:  ? Pp3c4_17360 Secondary Identifier:  ? PAC:32921969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_17360 0.5kb upstream 0.5kb upstream 6137 true Chr04: 11972802-11978938 Physcomitrium patens
Pp3c4_17360 0.5kb upstream 0.5kb upstream 500 false Chr04: 11978439-11978938 Physcomitrium patens
Pp3c4_17360 0.5kb downstream 0.5kb downstream 6137 true Chr04: 11972302-11978438 Physcomitrium patens
Pp3c4_17360 0.5kb downstream 0.5kb downstream 500 false Chr04: 11972302-11972801 Physcomitrium patens
Pp3c4_17360 1.0kb upstream 1.0kb upstream 6637 true Chr04: 11972802-11979438 Physcomitrium patens
Pp3c4_17360 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11978439-11979438 Physcomitrium patens
Pp3c4_17360 1.0kb downstream 1.0kb downstream 6637 true Chr04: 11971802-11978438 Physcomitrium patens
Pp3c4_17360 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11971802-11972801 Physcomitrium patens
Pp3c4_17360 2.0kb upstream 2.0kb upstream 7637 true Chr04: 11972802-11980438 Physcomitrium patens
Pp3c4_17360 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11978439-11980438 Physcomitrium patens
Pp3c4_17360 2.0kb downstream 2.0kb downstream 7637 true Chr04: 11970802-11978438 Physcomitrium patens
Pp3c4_17360 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11970802-11972801 Physcomitrium patens
Pp3c4_17360 5.0kb upstream 5.0kb upstream 10637 true Chr04: 11972802-11983438 Physcomitrium patens
Pp3c4_17360 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11978439-11983438 Physcomitrium patens
Pp3c4_17360 5.0kb downstream 5.0kb downstream 10637 true Chr04: 11967802-11978438 Physcomitrium patens
Pp3c4_17360 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11967802-11972801 Physcomitrium patens
Pp3c4_17360 10.0kb upstream 10.0kb upstream 15637 true Chr04: 11972802-11988438 Physcomitrium patens
Pp3c4_17360 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11978439-11988438 Physcomitrium patens
Pp3c4_17360 10.0kb downstream 10.0kb downstream 15637 true Chr04: 11962802-11978438 Physcomitrium patens
Pp3c4_17360 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11962802-11972801 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345760 5274 Embryophyte View MSA
123428488 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.772        
cufflinks 0.579        
cufflinks 0.265       Low
cufflinks 0.649        
cufflinks 1.934       High
cufflinks 0.396        
cufflinks 0.653        
cufflinks 1.453       High
cufflinks 1.527       High
cufflinks 0.73        
cufflinks 0.522        
cufflinks 0.605        
cufflinks 0.852        
cufflinks 0.369       Low
cufflinks 0.378       Low
cufflinks 0.803        
cufflinks 0.754        
cufflinks 0.431        
cufflinks 0.545        
cufflinks 0.394        
cufflinks 0.577        
cufflinks 0.451        
cufflinks 0.549        
cufflinks 0.823        
cufflinks 1.778       High
cufflinks 1.144       High
cufflinks 0.371       Low
cufflinks 0.791        
cufflinks 0.401        
cufflinks 1.001        

0 Strain