Gene : Pp3c4_4230 P. patens v3.3
Defline:  (1 of 32) 2.7.11.25 - Mitogen-activated protein kinase kinase kinase / MLTK Genomic Order:  200
Name:  ? Pp3c4_4230 Secondary Identifier:  ? PAC:32920306
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_4230 0.5kb upstream 0.5kb upstream 4420 true Chr04: 3082989-3087408 Physcomitrium patens
Pp3c4_4230 0.5kb upstream 0.5kb upstream 500 false Chr04: 3082989-3083488 Physcomitrium patens
Pp3c4_4230 0.5kb downstream 0.5kb downstream 4420 true Chr04: 3083489-3087908 Physcomitrium patens
Pp3c4_4230 0.5kb downstream 0.5kb downstream 500 false Chr04: 3087409-3087908 Physcomitrium patens
Pp3c4_4230 1.0kb upstream 1.0kb upstream 4920 true Chr04: 3082489-3087408 Physcomitrium patens
Pp3c4_4230 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3082489-3083488 Physcomitrium patens
Pp3c4_4230 1.0kb downstream 1.0kb downstream 4920 true Chr04: 3083489-3088408 Physcomitrium patens
Pp3c4_4230 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3087409-3088408 Physcomitrium patens
Pp3c4_4230 2.0kb upstream 2.0kb upstream 5920 true Chr04: 3081489-3087408 Physcomitrium patens
Pp3c4_4230 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3081489-3083488 Physcomitrium patens
Pp3c4_4230 2.0kb downstream 2.0kb downstream 5920 true Chr04: 3083489-3089408 Physcomitrium patens
Pp3c4_4230 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3087409-3089408 Physcomitrium patens
Pp3c4_4230 5.0kb upstream 5.0kb upstream 8920 true Chr04: 3078489-3087408 Physcomitrium patens
Pp3c4_4230 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3078489-3083488 Physcomitrium patens
Pp3c4_4230 5.0kb downstream 5.0kb downstream 8920 true Chr04: 3083489-3092408 Physcomitrium patens
Pp3c4_4230 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3087409-3092408 Physcomitrium patens
Pp3c4_4230 10.0kb upstream 10.0kb upstream 13920 true Chr04: 3073489-3087408 Physcomitrium patens
Pp3c4_4230 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3073489-3083488 Physcomitrium patens
Pp3c4_4230 10.0kb downstream 10.0kb downstream 13920 true Chr04: 3083489-3097408 Physcomitrium patens
Pp3c4_4230 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3087409-3097408 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351920 5274 Embryophyte View MSA
123427651 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.151       Low
cufflinks 0.168       Low
cufflinks 3.811        
cufflinks 1.431        
cufflinks 0.35       Low
cufflinks 8.427       High
cufflinks 3.741        
cufflinks 2.361        
cufflinks 0.643        
cufflinks 0.292       Low
cufflinks 9.794       High
cufflinks 0.504        
cufflinks 0.506        
cufflinks 2.251        
cufflinks 0.335       Low
cufflinks 0.224       Low
cufflinks 1.411        
cufflinks 0.4        
cufflinks 4.24        
cufflinks 4.277        
cufflinks 5.838       High
cufflinks 2.916        
cufflinks 5.845       High
cufflinks 0.809        
cufflinks 0.339       Low
cufflinks 9.368       High
cufflinks 3.718        
cufflinks 4.393        
cufflinks 1.148        
cufflinks 2.202        

0 Strain