Gene : Pp3c4_6840 P. patens v3.3
Defline:  (1 of 2) PTHR11842:SF10 - MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2B Genomic Order:  315
Name:  ? Pp3c4_6840 Secondary Identifier:  ? PAC:32919178
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_6840 0.5kb upstream 0.5kb upstream 4795 true Chr04: 4742876-4747670 Physcomitrium patens
Pp3c4_6840 0.5kb upstream 0.5kb upstream 500 false Chr04: 4742876-4743375 Physcomitrium patens
Pp3c4_6840 0.5kb downstream 0.5kb downstream 4795 true Chr04: 4743376-4748170 Physcomitrium patens
Pp3c4_6840 0.5kb downstream 0.5kb downstream 500 false Chr04: 4747671-4748170 Physcomitrium patens
Pp3c4_6840 1.0kb upstream 1.0kb upstream 5295 true Chr04: 4742376-4747670 Physcomitrium patens
Pp3c4_6840 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4742376-4743375 Physcomitrium patens
Pp3c4_6840 1.0kb downstream 1.0kb downstream 5295 true Chr04: 4743376-4748670 Physcomitrium patens
Pp3c4_6840 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4747671-4748670 Physcomitrium patens
Pp3c4_6840 2.0kb upstream 2.0kb upstream 6295 true Chr04: 4741376-4747670 Physcomitrium patens
Pp3c4_6840 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4741376-4743375 Physcomitrium patens
Pp3c4_6840 2.0kb downstream 2.0kb downstream 6295 true Chr04: 4743376-4749670 Physcomitrium patens
Pp3c4_6840 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4747671-4749670 Physcomitrium patens
Pp3c4_6840 5.0kb upstream 5.0kb upstream 9295 true Chr04: 4738376-4747670 Physcomitrium patens
Pp3c4_6840 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4738376-4743375 Physcomitrium patens
Pp3c4_6840 5.0kb downstream 5.0kb downstream 9295 true Chr04: 4743376-4752670 Physcomitrium patens
Pp3c4_6840 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4747671-4752670 Physcomitrium patens
Pp3c4_6840 10.0kb upstream 10.0kb upstream 14295 true Chr04: 4733376-4747670 Physcomitrium patens
Pp3c4_6840 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4733376-4743375 Physcomitrium patens
Pp3c4_6840 10.0kb downstream 10.0kb downstream 14295 true Chr04: 4743376-4757670 Physcomitrium patens
Pp3c4_6840 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4747671-4757670 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345538 5274 Embryophyte View MSA
123425576 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain