Gene : Pp3c4_8640 P. patens v3.3
Defline:  (1 of 1) PTHR23076:SF49 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  421
Name:  ? Pp3c4_8640 Secondary Identifier:  ? PAC:32919087
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_8640 0.5kb upstream 0.5kb upstream 7394 true Chr04: 5978163-5985556 Physcomitrium patens
Pp3c4_8640 0.5kb upstream 0.5kb upstream 500 false Chr04: 5978163-5978662 Physcomitrium patens
Pp3c4_8640 0.5kb downstream 0.5kb downstream 7394 true Chr04: 5978663-5986056 Physcomitrium patens
Pp3c4_8640 0.5kb downstream 0.5kb downstream 500 false Chr04: 5985557-5986056 Physcomitrium patens
Pp3c4_8640 1.0kb upstream 1.0kb upstream 7894 true Chr04: 5977663-5985556 Physcomitrium patens
Pp3c4_8640 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5977663-5978662 Physcomitrium patens
Pp3c4_8640 1.0kb downstream 1.0kb downstream 7894 true Chr04: 5978663-5986556 Physcomitrium patens
Pp3c4_8640 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5985557-5986556 Physcomitrium patens
Pp3c4_8640 2.0kb upstream 2.0kb upstream 8894 true Chr04: 5976663-5985556 Physcomitrium patens
Pp3c4_8640 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5976663-5978662 Physcomitrium patens
Pp3c4_8640 2.0kb downstream 2.0kb downstream 8894 true Chr04: 5978663-5987556 Physcomitrium patens
Pp3c4_8640 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5985557-5987556 Physcomitrium patens
Pp3c4_8640 5.0kb upstream 5.0kb upstream 11894 true Chr04: 5973663-5985556 Physcomitrium patens
Pp3c4_8640 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5973663-5978662 Physcomitrium patens
Pp3c4_8640 5.0kb downstream 5.0kb downstream 11894 true Chr04: 5978663-5990556 Physcomitrium patens
Pp3c4_8640 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5985557-5990556 Physcomitrium patens
Pp3c4_8640 10.0kb upstream 10.0kb upstream 16894 true Chr04: 5968663-5985556 Physcomitrium patens
Pp3c4_8640 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5968663-5978662 Physcomitrium patens
Pp3c4_8640 10.0kb downstream 10.0kb downstream 16894 true Chr04: 5978663-5995556 Physcomitrium patens
Pp3c4_8640 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5985557-5995556 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345104 5274 Embryophyte View MSA
123380156 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.645       High
cufflinks 6.331        
cufflinks 6.114        
cufflinks 2.656        
cufflinks 3.258        
cufflinks 6.39        
cufflinks 4.879        
cufflinks 2.351       Low
cufflinks 5.99        
cufflinks 4.212        
cufflinks 4.13        
cufflinks 7.267        
cufflinks 5.195        
cufflinks 7.878       High
cufflinks 4.254        
cufflinks 5.62        
cufflinks 3.023        
cufflinks 5.481        
cufflinks 1.318       Low
cufflinks 4.765        
cufflinks 9.494       High
cufflinks 6.149        
cufflinks 10.287       High
cufflinks 2.709        
cufflinks 6.409        
cufflinks 1.73       Low
cufflinks 2.293       Low
cufflinks 1.404       Low
cufflinks 4.62        
cufflinks 3.644        

0 Strain