Gene : Pp3c5_14640 P. patens v3.3
Genomic Order:  663 Name:  ? Pp3c5_14640
Secondary Identifier:  ? PAC:32953233
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c5_14640 0.5kb upstream 0.5kb upstream 6369 true Chr05: 10407876-10414244 Physcomitrium patens
Pp3c5_14640 0.5kb upstream 0.5kb upstream 500 false Chr05: 10413745-10414244 Physcomitrium patens
Pp3c5_14640 0.5kb downstream 0.5kb downstream 6369 true Chr05: 10407376-10413744 Physcomitrium patens
Pp3c5_14640 0.5kb downstream 0.5kb downstream 500 false Chr05: 10407376-10407875 Physcomitrium patens
Pp3c5_14640 1.0kb upstream 1.0kb upstream 6869 true Chr05: 10407876-10414744 Physcomitrium patens
Pp3c5_14640 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10413745-10414744 Physcomitrium patens
Pp3c5_14640 1.0kb downstream 1.0kb downstream 6869 true Chr05: 10406876-10413744 Physcomitrium patens
Pp3c5_14640 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10406876-10407875 Physcomitrium patens
Pp3c5_14640 2.0kb upstream 2.0kb upstream 7869 true Chr05: 10407876-10415744 Physcomitrium patens
Pp3c5_14640 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10413745-10415744 Physcomitrium patens
Pp3c5_14640 2.0kb downstream 2.0kb downstream 7869 true Chr05: 10405876-10413744 Physcomitrium patens
Pp3c5_14640 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10405876-10407875 Physcomitrium patens
Pp3c5_14640 5.0kb upstream 5.0kb upstream 10869 true Chr05: 10407876-10418744 Physcomitrium patens
Pp3c5_14640 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10413745-10418744 Physcomitrium patens
Pp3c5_14640 5.0kb downstream 5.0kb downstream 10869 true Chr05: 10402876-10413744 Physcomitrium patens
Pp3c5_14640 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10402876-10407875 Physcomitrium patens
Pp3c5_14640 10.0kb upstream 10.0kb upstream 15869 true Chr05: 10407876-10423744 Physcomitrium patens
Pp3c5_14640 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10413745-10423744 Physcomitrium patens
Pp3c5_14640 10.0kb downstream 10.0kb downstream 15869 true Chr05: 10397876-10413744 Physcomitrium patens
Pp3c5_14640 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10397876-10407875 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342439 5274 Embryophyte View MSA
123378999 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.249       Low
cufflinks 5.271        
cufflinks 4.978        
cufflinks 0.434       Low
cufflinks 3.276        
cufflinks 4.15        
cufflinks 2.298        
cufflinks 4.94        
cufflinks 0.385       Low
cufflinks 8.089       High
cufflinks 1.183       Low
cufflinks 5.637        
cufflinks 4.025        
cufflinks 2.057        
cufflinks 3.004        
cufflinks 5.081        
cufflinks 1.311       Low
cufflinks 10.267       High
cufflinks 4.916        
cufflinks 8.274       High
cufflinks 4.004        
cufflinks 1.809        
cufflinks 8.488       High
cufflinks 8.234       High
cufflinks 3.972        
cufflinks 7.402        
cufflinks 4.249        
cufflinks 6.258        
cufflinks 3.63        
cufflinks 3.998        

0 Strain