Gene : Pp3c5_14790 P. patens v3.3
Defline:  (1 of 59) PTHR22814:SF105 - HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEIN Genomic Order:  670
Name:  ? Pp3c5_14790 Secondary Identifier:  ? PAC:32956020
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c5_14790 0.5kb upstream 0.5kb upstream 3170 true Chr05: 10497756-10500925 Physcomitrium patens
Pp3c5_14790 0.5kb upstream 0.5kb upstream 500 false Chr05: 10497756-10498255 Physcomitrium patens
Pp3c5_14790 0.5kb downstream 0.5kb downstream 3170 true Chr05: 10498256-10501425 Physcomitrium patens
Pp3c5_14790 0.5kb downstream 0.5kb downstream 500 false Chr05: 10500926-10501425 Physcomitrium patens
Pp3c5_14790 1.0kb upstream 1.0kb upstream 3670 true Chr05: 10497256-10500925 Physcomitrium patens
Pp3c5_14790 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10497256-10498255 Physcomitrium patens
Pp3c5_14790 1.0kb downstream 1.0kb downstream 3670 true Chr05: 10498256-10501925 Physcomitrium patens
Pp3c5_14790 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10500926-10501925 Physcomitrium patens
Pp3c5_14790 2.0kb upstream 2.0kb upstream 4670 true Chr05: 10496256-10500925 Physcomitrium patens
Pp3c5_14790 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10496256-10498255 Physcomitrium patens
Pp3c5_14790 2.0kb downstream 2.0kb downstream 4670 true Chr05: 10498256-10502925 Physcomitrium patens
Pp3c5_14790 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10500926-10502925 Physcomitrium patens
Pp3c5_14790 5.0kb upstream 5.0kb upstream 7670 true Chr05: 10493256-10500925 Physcomitrium patens
Pp3c5_14790 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10493256-10498255 Physcomitrium patens
Pp3c5_14790 5.0kb downstream 5.0kb downstream 7670 true Chr05: 10498256-10505925 Physcomitrium patens
Pp3c5_14790 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10500926-10505925 Physcomitrium patens
Pp3c5_14790 10.0kb upstream 10.0kb upstream 12670 true Chr05: 10488256-10500925 Physcomitrium patens
Pp3c5_14790 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10488256-10498255 Physcomitrium patens
Pp3c5_14790 10.0kb downstream 10.0kb downstream 12670 true Chr05: 10498256-10510925 Physcomitrium patens
Pp3c5_14790 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10500926-10510925 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121349216 5274 Embryophyte View MSA
123381219 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.735     High High
cufflinks 13.841        
cufflinks 67.502     High High
cufflinks 16.097        
cufflinks 13.11        
cufflinks 5.909        
cufflinks 43.886     High High
cufflinks 14.138        
cufflinks 110.043     High High
cufflinks 1.542       Low
cufflinks 3.801        
cufflinks 2.338       Low
cufflinks 16.604        
cufflinks 21.605        
cufflinks 1.95       Low
cufflinks 103.562     High High
cufflinks 12.526        
cufflinks 0.513       Low
cufflinks 1.529       Low
cufflinks 1.08       Low
cufflinks 2.544        
cufflinks 3.149        
cufflinks 9.312        
cufflinks 11.39        
cufflinks 4.086        
cufflinks 78.525     High High
cufflinks 16.763        
cufflinks 16.957        
cufflinks 8.292        
cufflinks 8.277        

0 Strain