Gene : Pp3c5_21220 P. patens v3.3
Defline:  (1 of 2) PTHR19229:SF36 - PROTEIN ABT-4 Genomic Order:  984
Name:  ? Pp3c5_21220 Secondary Identifier:  ? PAC:32953215
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c5_21220 0.5kb upstream 0.5kb upstream 12521 true Chr05: 14917460-14929980 Physcomitrium patens
Pp3c5_21220 0.5kb upstream 0.5kb upstream 500 false Chr05: 14917460-14917959 Physcomitrium patens
Pp3c5_21220 0.5kb downstream 0.5kb downstream 12521 true Chr05: 14917960-14930480 Physcomitrium patens
Pp3c5_21220 0.5kb downstream 0.5kb downstream 500 false Chr05: 14929981-14930480 Physcomitrium patens
Pp3c5_21220 1.0kb upstream 1.0kb upstream 13021 true Chr05: 14916960-14929980 Physcomitrium patens
Pp3c5_21220 1.0kb upstream 1.0kb upstream 1000 false Chr05: 14916960-14917959 Physcomitrium patens
Pp3c5_21220 1.0kb downstream 1.0kb downstream 13021 true Chr05: 14917960-14930980 Physcomitrium patens
Pp3c5_21220 1.0kb downstream 1.0kb downstream 1000 false Chr05: 14929981-14930980 Physcomitrium patens
Pp3c5_21220 2.0kb upstream 2.0kb upstream 14021 true Chr05: 14915960-14929980 Physcomitrium patens
Pp3c5_21220 2.0kb upstream 2.0kb upstream 2000 false Chr05: 14915960-14917959 Physcomitrium patens
Pp3c5_21220 2.0kb downstream 2.0kb downstream 14021 true Chr05: 14917960-14931980 Physcomitrium patens
Pp3c5_21220 2.0kb downstream 2.0kb downstream 2000 false Chr05: 14929981-14931980 Physcomitrium patens
Pp3c5_21220 5.0kb upstream 5.0kb upstream 17021 true Chr05: 14912960-14929980 Physcomitrium patens
Pp3c5_21220 5.0kb upstream 5.0kb upstream 5000 false Chr05: 14912960-14917959 Physcomitrium patens
Pp3c5_21220 5.0kb downstream 5.0kb downstream 17021 true Chr05: 14917960-14934980 Physcomitrium patens
Pp3c5_21220 5.0kb downstream 5.0kb downstream 5000 false Chr05: 14929981-14934980 Physcomitrium patens
Pp3c5_21220 10.0kb upstream 10.0kb upstream 22021 true Chr05: 14907960-14929980 Physcomitrium patens
Pp3c5_21220 10.0kb upstream 10.0kb upstream 10000 false Chr05: 14907960-14917959 Physcomitrium patens
Pp3c5_21220 10.0kb downstream 10.0kb downstream 22021 true Chr05: 14917960-14939980 Physcomitrium patens
Pp3c5_21220 10.0kb downstream 10.0kb downstream 10000 false Chr05: 14929981-14939980 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429075 5275 Viridiplantae View MSA
121345531 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.078       Low
cufflinks 0.757       High
cufflinks 0.32        
cufflinks 0.158       Low
cufflinks 0.3        
cufflinks 0.104       Low
cufflinks 0.658        
cufflinks 0.642        
cufflinks 0.341        
cufflinks 0.563        
cufflinks 0.873       High
cufflinks 0.627        
cufflinks 0.625        
cufflinks 0.493        
cufflinks 0.38        
cufflinks 0.178        
cufflinks 0.164       Low
cufflinks 0.868       High
cufflinks 0.242        
cufflinks 0.648        
cufflinks 0.275        
cufflinks 1.035       High
cufflinks 0.298        
cufflinks 0.348        
cufflinks 0.112       Low
cufflinks 0.459        
cufflinks 0.372        
cufflinks 0.086       Low
cufflinks 0.554        
cufflinks 0.25        

0 Strain