Gene : Pp3c5_7600 P. patens v3.3
Genomic Order:  357 Name:  ? Pp3c5_7600
Secondary Identifier:  ? PAC:32953431
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c5_7600 0.5kb upstream 0.5kb upstream 4212 true Chr05: 5411302-5415513 Physcomitrium patens
Pp3c5_7600 0.5kb upstream 0.5kb upstream 500 false Chr05: 5411302-5411801 Physcomitrium patens
Pp3c5_7600 0.5kb downstream 0.5kb downstream 4212 true Chr05: 5411802-5416013 Physcomitrium patens
Pp3c5_7600 0.5kb downstream 0.5kb downstream 500 false Chr05: 5415514-5416013 Physcomitrium patens
Pp3c5_7600 1.0kb upstream 1.0kb upstream 4712 true Chr05: 5410802-5415513 Physcomitrium patens
Pp3c5_7600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5410802-5411801 Physcomitrium patens
Pp3c5_7600 1.0kb downstream 1.0kb downstream 4712 true Chr05: 5411802-5416513 Physcomitrium patens
Pp3c5_7600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5415514-5416513 Physcomitrium patens
Pp3c5_7600 2.0kb upstream 2.0kb upstream 5712 true Chr05: 5409802-5415513 Physcomitrium patens
Pp3c5_7600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5409802-5411801 Physcomitrium patens
Pp3c5_7600 2.0kb downstream 2.0kb downstream 5712 true Chr05: 5411802-5417513 Physcomitrium patens
Pp3c5_7600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5415514-5417513 Physcomitrium patens
Pp3c5_7600 5.0kb upstream 5.0kb upstream 8712 true Chr05: 5406802-5415513 Physcomitrium patens
Pp3c5_7600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5406802-5411801 Physcomitrium patens
Pp3c5_7600 5.0kb downstream 5.0kb downstream 8712 true Chr05: 5411802-5420513 Physcomitrium patens
Pp3c5_7600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5415514-5420513 Physcomitrium patens
Pp3c5_7600 10.0kb upstream 10.0kb upstream 13712 true Chr05: 5401802-5415513 Physcomitrium patens
Pp3c5_7600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5401802-5411801 Physcomitrium patens
Pp3c5_7600 10.0kb downstream 10.0kb downstream 13712 true Chr05: 5411802-5425513 Physcomitrium patens
Pp3c5_7600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5415514-5425513 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346069 5274 Embryophyte View MSA
123380318 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.917        
cufflinks 5.039        
cufflinks 6.032        
cufflinks 3.719        
cufflinks 4.425        
cufflinks 2.363        
cufflinks 1.475       Low
cufflinks 5.766        
cufflinks 1.984        
cufflinks 6.504       High
cufflinks 4.562        
cufflinks 1.378       Low
cufflinks 4.208        
cufflinks 0.634       Low
cufflinks 6.794       High
cufflinks 2.898        
cufflinks 5.416        
cufflinks 5.996        
cufflinks 7.49       High
cufflinks 3.921        
cufflinks 5.296        
cufflinks 2.516        
cufflinks 3.94        
cufflinks 4.077        
cufflinks 3.838        
cufflinks 4.474        
cufflinks 5.474        
cufflinks 4.274        
cufflinks 0.709       Low
cufflinks 3.179        

0 Strain