Gene : Pp3c6_18400 P. patens v3.3
Defline:  (1 of 4) 3.1.1.47 - 1-alkyl-2-acetylglycerophosphocholine esterase / Platelet-activating factor acetylhydrolase Genomic Order:  872
Name:  ? Pp3c6_18400 Secondary Identifier:  ? PAC:32975309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c6_18400 0.5kb upstream 0.5kb upstream 4691   true Chr06: 11766807-11771497 Physcomitrium patens
Pp3c6_18400 0.5kb upstream 0.5kb upstream 500   false Chr06: 11770998-11771497 Physcomitrium patens
Pp3c6_18400 0.5kb downstream 0.5kb downstream 4691   true Chr06: 11766307-11770997 Physcomitrium patens
Pp3c6_18400 0.5kb downstream 0.5kb downstream 500   false Chr06: 11766307-11766806 Physcomitrium patens
Pp3c6_18400 1.0kb upstream 1.0kb upstream 5191   true Chr06: 11766807-11771997 Physcomitrium patens
Pp3c6_18400 1.0kb upstream 1.0kb upstream 1000   false Chr06: 11770998-11771997 Physcomitrium patens
Pp3c6_18400 1.0kb downstream 1.0kb downstream 5191   true Chr06: 11765807-11770997 Physcomitrium patens
Pp3c6_18400 1.0kb downstream 1.0kb downstream 1000   false Chr06: 11765807-11766806 Physcomitrium patens
Pp3c6_18400 2.0kb upstream 2.0kb upstream 6191   true Chr06: 11766807-11772997 Physcomitrium patens
Pp3c6_18400 2.0kb upstream 2.0kb upstream 2000   false Chr06: 11770998-11772997 Physcomitrium patens
Pp3c6_18400 2.0kb downstream 2.0kb downstream 6191   true Chr06: 11764807-11770997 Physcomitrium patens
Pp3c6_18400 2.0kb downstream 2.0kb downstream 2000   false Chr06: 11764807-11766806 Physcomitrium patens
Pp3c6_18400 5.0kb upstream 5.0kb upstream 9191   true Chr06: 11766807-11775997 Physcomitrium patens
Pp3c6_18400 5.0kb upstream 5.0kb upstream 5000   false Chr06: 11770998-11775997 Physcomitrium patens
Pp3c6_18400 5.0kb downstream 5.0kb downstream 9191   true Chr06: 11761807-11770997 Physcomitrium patens
Pp3c6_18400 5.0kb downstream 5.0kb downstream 5000   false Chr06: 11761807-11766806 Physcomitrium patens
Pp3c6_18400 10.0kb upstream 10.0kb upstream 14191   true Chr06: 11766807-11780997 Physcomitrium patens
Pp3c6_18400 10.0kb upstream 10.0kb upstream 10000   false Chr06: 11770998-11780997 Physcomitrium patens
Pp3c6_18400 10.0kb downstream 10.0kb downstream 14191   true Chr06: 11756807-11770997 Physcomitrium patens
Pp3c6_18400 10.0kb downstream 10.0kb downstream 10000   false Chr06: 11756807-11766806 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343187 5274 Embryophyte View MSA
123427022 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.539        
cufflinks 10.522        
cufflinks 8.522        
cufflinks 2.293        
cufflinks 0.547       Low
cufflinks 6.963        
cufflinks 12.152        
cufflinks 0.957       Low
cufflinks 8.849        
cufflinks 7.9        
cufflinks 9.498        
cufflinks 9.879        
cufflinks 2.025       Low
cufflinks 12.052        
cufflinks 4.273        
cufflinks 11.721        
cufflinks 6.604        
cufflinks 1.622       Low
cufflinks 9.067        
cufflinks 9.549        
cufflinks 6.501        
cufflinks 9.807        
cufflinks 9.617        
cufflinks 6.57        
cufflinks 3.859        
cufflinks 5.27        
cufflinks 0.512       Low
cufflinks 10.937        
cufflinks 8.803        
cufflinks 4.38        

0 Strain