Gene : Pp3c6_14050 P. patens v3.3
Genomic Order:  652 Name:  ? Pp3c6_14050
Secondary Identifier:  ? PAC:32975957
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c6_14050 0.5kb upstream 0.5kb upstream 2929   true Chr06: 8984356-8987284 Physcomitrium patens
Pp3c6_14050 0.5kb upstream 0.5kb upstream 500   false Chr06: 8986785-8987284 Physcomitrium patens
Pp3c6_14050 0.5kb downstream 0.5kb downstream 2929   true Chr06: 8983856-8986784 Physcomitrium patens
Pp3c6_14050 0.5kb downstream 0.5kb downstream 500   false Chr06: 8983856-8984355 Physcomitrium patens
Pp3c6_14050 1.0kb upstream 1.0kb upstream 3429   true Chr06: 8984356-8987784 Physcomitrium patens
Pp3c6_14050 1.0kb upstream 1.0kb upstream 1000   false Chr06: 8986785-8987784 Physcomitrium patens
Pp3c6_14050 1.0kb downstream 1.0kb downstream 3429   true Chr06: 8983356-8986784 Physcomitrium patens
Pp3c6_14050 1.0kb downstream 1.0kb downstream 1000   false Chr06: 8983356-8984355 Physcomitrium patens
Pp3c6_14050 2.0kb upstream 2.0kb upstream 4429   true Chr06: 8984356-8988784 Physcomitrium patens
Pp3c6_14050 2.0kb upstream 2.0kb upstream 2000   false Chr06: 8986785-8988784 Physcomitrium patens
Pp3c6_14050 2.0kb downstream 2.0kb downstream 4429   true Chr06: 8982356-8986784 Physcomitrium patens
Pp3c6_14050 2.0kb downstream 2.0kb downstream 2000   false Chr06: 8982356-8984355 Physcomitrium patens
Pp3c6_14050 5.0kb upstream 5.0kb upstream 7429   true Chr06: 8984356-8991784 Physcomitrium patens
Pp3c6_14050 5.0kb upstream 5.0kb upstream 5000   false Chr06: 8986785-8991784 Physcomitrium patens
Pp3c6_14050 5.0kb downstream 5.0kb downstream 7429   true Chr06: 8979356-8986784 Physcomitrium patens
Pp3c6_14050 5.0kb downstream 5.0kb downstream 5000   false Chr06: 8979356-8984355 Physcomitrium patens
Pp3c6_14050 10.0kb upstream 10.0kb upstream 12429   true Chr06: 8984356-8996784 Physcomitrium patens
Pp3c6_14050 10.0kb upstream 10.0kb upstream 10000   false Chr06: 8986785-8996784 Physcomitrium patens
Pp3c6_14050 10.0kb downstream 10.0kb downstream 12429   true Chr06: 8974356-8986784 Physcomitrium patens
Pp3c6_14050 10.0kb downstream 10.0kb downstream 10000   false Chr06: 8974356-8984355 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342982 5274 Embryophyte View MSA
123379356 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.072        
cufflinks 0.313        
cufflinks 0.56        
cufflinks 0.63        
cufflinks 0.174        
cufflinks 0.014     Low Low
cufflinks 0.079        
cufflinks 0.683        
cufflinks 0.175        
cufflinks 1.118       High
cufflinks 1.07       High
cufflinks 0.294        
cufflinks 0.179        
cufflinks 0.243        
cufflinks 0.914       High
cufflinks 0.458        
cufflinks 0.598        
cufflinks 0.564        
cufflinks 0.028     Low Low
cufflinks 0.765        
cufflinks 0.283        
cufflinks 0.747        
cufflinks 0.016     Low Low
cufflinks 0.096        
cufflinks 0.081     Low  
cufflinks 0.304        
cufflinks 0.043     Low Low
cufflinks 0.356        
cufflinks 0.623        
cufflinks 0.012     Low Low

0 Strain