Gene : Pp3c6_1460 P. patens v3.3
Genomic Order:  72 Name:  ? Pp3c6_1460
Secondary Identifier:  ? PAC:32977001
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c6_1460 0.5kb upstream 0.5kb upstream 1970   true Chr06: 764754-766723 Physcomitrium patens
Pp3c6_1460 0.5kb upstream 0.5kb upstream 500   false Chr06: 764754-765253 Physcomitrium patens
Pp3c6_1460 0.5kb downstream 0.5kb downstream 1970   true Chr06: 765254-767223 Physcomitrium patens
Pp3c6_1460 0.5kb downstream 0.5kb downstream 500   false Chr06: 766724-767223 Physcomitrium patens
Pp3c6_1460 1.0kb upstream 1.0kb upstream 2470   true Chr06: 764254-766723 Physcomitrium patens
Pp3c6_1460 1.0kb upstream 1.0kb upstream 1000   false Chr06: 764254-765253 Physcomitrium patens
Pp3c6_1460 1.0kb downstream 1.0kb downstream 2470   true Chr06: 765254-767723 Physcomitrium patens
Pp3c6_1460 1.0kb downstream 1.0kb downstream 1000   false Chr06: 766724-767723 Physcomitrium patens
Pp3c6_1460 2.0kb upstream 2.0kb upstream 3470   true Chr06: 763254-766723 Physcomitrium patens
Pp3c6_1460 2.0kb upstream 2.0kb upstream 2000   false Chr06: 763254-765253 Physcomitrium patens
Pp3c6_1460 2.0kb downstream 2.0kb downstream 3470   true Chr06: 765254-768723 Physcomitrium patens
Pp3c6_1460 2.0kb downstream 2.0kb downstream 2000   false Chr06: 766724-768723 Physcomitrium patens
Pp3c6_1460 5.0kb upstream 5.0kb upstream 6470   true Chr06: 760254-766723 Physcomitrium patens
Pp3c6_1460 5.0kb upstream 5.0kb upstream 5000   false Chr06: 760254-765253 Physcomitrium patens
Pp3c6_1460 5.0kb downstream 5.0kb downstream 6470   true Chr06: 765254-771723 Physcomitrium patens
Pp3c6_1460 5.0kb downstream 5.0kb downstream 5000   false Chr06: 766724-771723 Physcomitrium patens
Pp3c6_1460 10.0kb upstream 10.0kb upstream 11470   true Chr06: 755254-766723 Physcomitrium patens
Pp3c6_1460 10.0kb upstream 10.0kb upstream 10000   false Chr06: 755254-765253 Physcomitrium patens
Pp3c6_1460 10.0kb downstream 10.0kb downstream 11470   true Chr06: 765254-776723 Physcomitrium patens
Pp3c6_1460 10.0kb downstream 10.0kb downstream 10000   false Chr06: 766724-776723 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342405 5274 Embryophyte View MSA
123378979 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.69        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low Low
cufflinks 0.02     Low Low
cufflinks 0.064     Low  
cufflinks 10.922        
cufflinks 68.457     High High
cufflinks 0.028     Low Low
cufflinks 0.007     Low Low
cufflinks 89.77     High High
cufflinks 0.052     Low  
cufflinks 21.2     High High
cufflinks 0.634        
cufflinks 9.068        
cufflinks 0.191        
cufflinks 0.76        
cufflinks 3.466        
cufflinks 1.146        
cufflinks 0.081        
cufflinks 13.67       High
cufflinks 0.117        
cufflinks 0.06     Low  
cufflinks 0.174        
cufflinks 0.123        
cufflinks 12.127        
cufflinks 0.813        
cufflinks 102.777     High High
cufflinks 1.149        
cufflinks 4.39        
cufflinks 0.024     Low Low

0 Strain