Gene : Pp3c6_14800 P. patens v3.3
Defline:  (1 of 1) KOG2973 - Uncharacterized conserved protein Genomic Order:  674
Name:  ? Pp3c6_14800 Secondary Identifier:  ? PAC:32975965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c6_14800 0.5kb upstream 0.5kb upstream 2118   true Chr06: 9540214-9542331 Physcomitrium patens
Pp3c6_14800 0.5kb upstream 0.5kb upstream 500   false Chr06: 9541832-9542331 Physcomitrium patens
Pp3c6_14800 0.5kb downstream 0.5kb downstream 2118   true Chr06: 9539714-9541831 Physcomitrium patens
Pp3c6_14800 0.5kb downstream 0.5kb downstream 500   false Chr06: 9539714-9540213 Physcomitrium patens
Pp3c6_14800 1.0kb upstream 1.0kb upstream 2618   true Chr06: 9540214-9542831 Physcomitrium patens
Pp3c6_14800 1.0kb upstream 1.0kb upstream 1000   false Chr06: 9541832-9542831 Physcomitrium patens
Pp3c6_14800 1.0kb downstream 1.0kb downstream 2618   true Chr06: 9539214-9541831 Physcomitrium patens
Pp3c6_14800 1.0kb downstream 1.0kb downstream 1000   false Chr06: 9539214-9540213 Physcomitrium patens
Pp3c6_14800 2.0kb upstream 2.0kb upstream 3618   true Chr06: 9540214-9543831 Physcomitrium patens
Pp3c6_14800 2.0kb upstream 2.0kb upstream 2000   false Chr06: 9541832-9543831 Physcomitrium patens
Pp3c6_14800 2.0kb downstream 2.0kb downstream 3618   true Chr06: 9538214-9541831 Physcomitrium patens
Pp3c6_14800 2.0kb downstream 2.0kb downstream 2000   false Chr06: 9538214-9540213 Physcomitrium patens
Pp3c6_14800 5.0kb upstream 5.0kb upstream 6618   true Chr06: 9540214-9546831 Physcomitrium patens
Pp3c6_14800 5.0kb upstream 5.0kb upstream 5000   false Chr06: 9541832-9546831 Physcomitrium patens
Pp3c6_14800 5.0kb downstream 5.0kb downstream 6618   true Chr06: 9535214-9541831 Physcomitrium patens
Pp3c6_14800 5.0kb downstream 5.0kb downstream 5000   false Chr06: 9535214-9540213 Physcomitrium patens
Pp3c6_14800 10.0kb upstream 10.0kb upstream 11618   true Chr06: 9540214-9551831 Physcomitrium patens
Pp3c6_14800 10.0kb upstream 10.0kb upstream 10000   false Chr06: 9541832-9551831 Physcomitrium patens
Pp3c6_14800 10.0kb downstream 10.0kb downstream 11618   true Chr06: 9530214-9541831 Physcomitrium patens
Pp3c6_14800 10.0kb downstream 10.0kb downstream 10000   false Chr06: 9530214-9540213 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345147 5274 Embryophyte View MSA
123424728 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.42        
cufflinks 4.121        
cufflinks 3.894        
cufflinks 0.948       Low
cufflinks 2.217        
cufflinks 2.873        
cufflinks 0.895       Low
cufflinks 2.816        
cufflinks 2.977        
cufflinks 1.797        
cufflinks 2.416        
cufflinks 4.67       High
cufflinks 2.132        
cufflinks 4.543       High
cufflinks 4.062        
cufflinks 4.123        
cufflinks 3.378        
cufflinks 1.231       Low
cufflinks 1.83        
cufflinks 0.518       Low
cufflinks 2.208        
cufflinks 4.802       High
cufflinks 2.234        
cufflinks 2.182        
cufflinks 5.033       High
cufflinks 3.763        
cufflinks 4.1        
cufflinks 2.324        
cufflinks 2.898        
cufflinks 4.083        

0 Strain