Gene : Pp3c6_24270 P. patens v3.3
Defline:  (1 of 2) 5.3.1.27 - 6-phospho-3-hexuloisomerase / Phospho-3-hexuloisomerase Genomic Order:  1153
Name:  ? Pp3c6_24270 Secondary Identifier:  ? PAC:32978274
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c6_24270 0.5kb upstream 0.5kb upstream 3037   true Chr06: 15959121-15962157 Physcomitrium patens
Pp3c6_24270 0.5kb upstream 0.5kb upstream 500   false Chr06: 15961658-15962157 Physcomitrium patens
Pp3c6_24270 0.5kb downstream 0.5kb downstream 3037   true Chr06: 15958621-15961657 Physcomitrium patens
Pp3c6_24270 0.5kb downstream 0.5kb downstream 500   false Chr06: 15958621-15959120 Physcomitrium patens
Pp3c6_24270 1.0kb upstream 1.0kb upstream 3537   true Chr06: 15959121-15962657 Physcomitrium patens
Pp3c6_24270 1.0kb upstream 1.0kb upstream 1000   false Chr06: 15961658-15962657 Physcomitrium patens
Pp3c6_24270 1.0kb downstream 1.0kb downstream 3537   true Chr06: 15958121-15961657 Physcomitrium patens
Pp3c6_24270 1.0kb downstream 1.0kb downstream 1000   false Chr06: 15958121-15959120 Physcomitrium patens
Pp3c6_24270 2.0kb upstream 2.0kb upstream 4537   true Chr06: 15959121-15963657 Physcomitrium patens
Pp3c6_24270 2.0kb upstream 2.0kb upstream 2000   false Chr06: 15961658-15963657 Physcomitrium patens
Pp3c6_24270 2.0kb downstream 2.0kb downstream 4537   true Chr06: 15957121-15961657 Physcomitrium patens
Pp3c6_24270 2.0kb downstream 2.0kb downstream 2000   false Chr06: 15957121-15959120 Physcomitrium patens
Pp3c6_24270 5.0kb upstream 5.0kb upstream 7537   true Chr06: 15959121-15966657 Physcomitrium patens
Pp3c6_24270 5.0kb upstream 5.0kb upstream 5000   false Chr06: 15961658-15966657 Physcomitrium patens
Pp3c6_24270 5.0kb downstream 5.0kb downstream 7537   true Chr06: 15954121-15961657 Physcomitrium patens
Pp3c6_24270 5.0kb downstream 5.0kb downstream 5000   false Chr06: 15954121-15959120 Physcomitrium patens
Pp3c6_24270 10.0kb upstream 10.0kb upstream 12537   true Chr06: 15959121-15971657 Physcomitrium patens
Pp3c6_24270 10.0kb upstream 10.0kb upstream 10000   false Chr06: 15961658-15971657 Physcomitrium patens
Pp3c6_24270 10.0kb downstream 10.0kb downstream 12537   true Chr06: 15949121-15961657 Physcomitrium patens
Pp3c6_24270 10.0kb downstream 10.0kb downstream 10000   false Chr06: 15949121-15959120 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348166 5274 Embryophyte View MSA
123380753 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.037        
cufflinks 0.589        
cufflinks 0.938        
cufflinks 0.838        
cufflinks 1.007        
cufflinks 0.397        
cufflinks 0.325        
cufflinks 0.457        
cufflinks 1.494       High
cufflinks 0.014     Low Low
cufflinks 0.635        
cufflinks 1.056        
cufflinks 0.111       Low
cufflinks 0.419        
cufflinks 0.097       Low
cufflinks 0.729        
cufflinks 0.261        
cufflinks 0.262        
cufflinks 0.307        
cufflinks 1.097        
cufflinks 1.145        
cufflinks 0.842        
cufflinks 1.788       High
cufflinks 0.604        
cufflinks 0.052     Low Low
cufflinks 0.015     Low Low
cufflinks 0.987        
cufflinks 0.882        
cufflinks 0.988        
cufflinks 0.532        

0 Strain