Gene : Pp3c6_23840 P. patens v3.3
Genomic Order:  1134 Name:  ? Pp3c6_23840
Secondary Identifier:  ? PAC:32977206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c6_23840 0.5kb upstream 0.5kb upstream 2672   true Chr06: 15596047-15598718 Physcomitrium patens
Pp3c6_23840 0.5kb upstream 0.5kb upstream 500   false Chr06: 15598219-15598718 Physcomitrium patens
Pp3c6_23840 0.5kb downstream 0.5kb downstream 2672   true Chr06: 15595547-15598218 Physcomitrium patens
Pp3c6_23840 0.5kb downstream 0.5kb downstream 500   false Chr06: 15595547-15596046 Physcomitrium patens
Pp3c6_23840 1.0kb upstream 1.0kb upstream 3172   true Chr06: 15596047-15599218 Physcomitrium patens
Pp3c6_23840 1.0kb upstream 1.0kb upstream 1000   false Chr06: 15598219-15599218 Physcomitrium patens
Pp3c6_23840 1.0kb downstream 1.0kb downstream 3172   true Chr06: 15595047-15598218 Physcomitrium patens
Pp3c6_23840 1.0kb downstream 1.0kb downstream 1000   false Chr06: 15595047-15596046 Physcomitrium patens
Pp3c6_23840 2.0kb upstream 2.0kb upstream 4172   true Chr06: 15596047-15600218 Physcomitrium patens
Pp3c6_23840 2.0kb upstream 2.0kb upstream 2000   false Chr06: 15598219-15600218 Physcomitrium patens
Pp3c6_23840 2.0kb downstream 2.0kb downstream 4172   true Chr06: 15594047-15598218 Physcomitrium patens
Pp3c6_23840 2.0kb downstream 2.0kb downstream 2000   false Chr06: 15594047-15596046 Physcomitrium patens
Pp3c6_23840 5.0kb upstream 5.0kb upstream 7172   true Chr06: 15596047-15603218 Physcomitrium patens
Pp3c6_23840 5.0kb upstream 5.0kb upstream 5000   false Chr06: 15598219-15603218 Physcomitrium patens
Pp3c6_23840 5.0kb downstream 5.0kb downstream 7172   true Chr06: 15591047-15598218 Physcomitrium patens
Pp3c6_23840 5.0kb downstream 5.0kb downstream 5000   false Chr06: 15591047-15596046 Physcomitrium patens
Pp3c6_23840 10.0kb upstream 10.0kb upstream 12172   true Chr06: 15596047-15608218 Physcomitrium patens
Pp3c6_23840 10.0kb upstream 10.0kb upstream 10000   false Chr06: 15598219-15608218 Physcomitrium patens
Pp3c6_23840 10.0kb downstream 10.0kb downstream 12172   true Chr06: 15586047-15598218 Physcomitrium patens
Pp3c6_23840 10.0kb downstream 10.0kb downstream 10000   false Chr06: 15586047-15596046 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348524 5274 Embryophyte View MSA
123380897 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.212        
cufflinks 4.895        
cufflinks 4.424        
cufflinks 3.973        
cufflinks 2.116       Low
cufflinks 3.673        
cufflinks 2.814       Low
cufflinks 4.462        
cufflinks 5.53       High
cufflinks 4.932        
cufflinks 4.981       High
cufflinks 2.496       Low
cufflinks 4.3        
cufflinks 2.948       Low
cufflinks 4.048        
cufflinks 2.924       Low
cufflinks 4.736        
cufflinks 4.368        
cufflinks 3.501        
cufflinks 2.764       Low
cufflinks 4.982       High
cufflinks 4.296        
cufflinks 2.636       Low
cufflinks 4.997       High
cufflinks 4.505        
cufflinks 4.525        
cufflinks 2.845       Low
cufflinks 3.505        
cufflinks 3.66        
cufflinks 3.956        

0 Strain