Gene : Pp3c6_19850 P. patens v3.3
Defline:  (1 of 2) PTHR10264:SF69 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 Genomic Order:  943
Name:  ? Pp3c6_19850 Secondary Identifier:  ? PAC:32977391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c6_19850 0.5kb upstream 0.5kb upstream 1502   true Chr06: 12669900-12671401 Physcomitrium patens
Pp3c6_19850 0.5kb upstream 0.5kb upstream 500   false Chr06: 12669900-12670399 Physcomitrium patens
Pp3c6_19850 0.5kb downstream 0.5kb downstream 1502   true Chr06: 12670400-12671901 Physcomitrium patens
Pp3c6_19850 0.5kb downstream 0.5kb downstream 500   false Chr06: 12671402-12671901 Physcomitrium patens
Pp3c6_19850 1.0kb upstream 1.0kb upstream 2002   true Chr06: 12669400-12671401 Physcomitrium patens
Pp3c6_19850 1.0kb upstream 1.0kb upstream 1000   false Chr06: 12669400-12670399 Physcomitrium patens
Pp3c6_19850 1.0kb downstream 1.0kb downstream 2002   true Chr06: 12670400-12672401 Physcomitrium patens
Pp3c6_19850 1.0kb downstream 1.0kb downstream 1000   false Chr06: 12671402-12672401 Physcomitrium patens
Pp3c6_19850 2.0kb upstream 2.0kb upstream 3002   true Chr06: 12668400-12671401 Physcomitrium patens
Pp3c6_19850 2.0kb upstream 2.0kb upstream 2000   false Chr06: 12668400-12670399 Physcomitrium patens
Pp3c6_19850 2.0kb downstream 2.0kb downstream 3002   true Chr06: 12670400-12673401 Physcomitrium patens
Pp3c6_19850 2.0kb downstream 2.0kb downstream 2000   false Chr06: 12671402-12673401 Physcomitrium patens
Pp3c6_19850 5.0kb upstream 5.0kb upstream 6002   true Chr06: 12665400-12671401 Physcomitrium patens
Pp3c6_19850 5.0kb upstream 5.0kb upstream 5000   false Chr06: 12665400-12670399 Physcomitrium patens
Pp3c6_19850 5.0kb downstream 5.0kb downstream 6002   true Chr06: 12670400-12676401 Physcomitrium patens
Pp3c6_19850 5.0kb downstream 5.0kb downstream 5000   false Chr06: 12671402-12676401 Physcomitrium patens
Pp3c6_19850 10.0kb upstream 10.0kb upstream 11002   true Chr06: 12660400-12671401 Physcomitrium patens
Pp3c6_19850 10.0kb upstream 10.0kb upstream 10000   false Chr06: 12660400-12670399 Physcomitrium patens
Pp3c6_19850 10.0kb downstream 10.0kb downstream 11002   true Chr06: 12670400-12681401 Physcomitrium patens
Pp3c6_19850 10.0kb downstream 10.0kb downstream 10000   false Chr06: 12671402-12681401 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348601 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  

0 Strain